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TAMM41 (TAM41 mitochondrial translocator assembly and maintenance homolog)

Identity

Alias (NCBI)C3orf31
RAM41
TAM41
HGNC (Hugo) TAMM41
HGNC Alias symbMGC16471
DKFZp434E0519
HGNC Previous nameC3orf31
HGNC Previous namechromosome 3 open reading frame 31
 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
LocusID (NCBI) 132001
Atlas_Id 74476
Location 3p25.2  [Link to chromosome band 3p25]
Location_base_pair Starts at 11790442 and ends at 11846885 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TAMM41 (3p25.2) / RAB1B (11q13.2)TAMM41 (3p25.2) / SGIP1 (1p31.3)VGLL4 (3p25.3) / TAMM41 (3p25.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TAMM41   25187
Cards
Entrez_Gene (NCBI)TAMM41    TAM41 mitochondrial translocator assembly and maintenance homolog
AliasesC3orf31; RAM41; TAM41
GeneCards (Weizmann)TAMM41
Ensembl hg19 (Hinxton)ENSG00000144559 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144559 [Gene_View]  ENSG00000144559 [Sequence]  chr3:11790442-11846885 [Contig_View]  TAMM41 [Vega]
ICGC DataPortalENSG00000144559
TCGA cBioPortalTAMM41
AceView (NCBI)TAMM41
Genatlas (Paris)TAMM41
SOURCE (Princeton)TAMM41
Genetics Home Reference (NIH)TAMM41
Genomic and cartography
GoldenPath hg38 (UCSC)TAMM41  -     chr3:11790442-11846885 -  3p25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAMM41  -     3p25.2   [Description]    (hg19-Feb_2009)
GoldenPathTAMM41 - 3p25.2 [CytoView hg19]  TAMM41 - 3p25.2 [CytoView hg38]
ImmunoBaseENSG00000144559
Genome Data Viewer NCBITAMM41 [Mapview hg19]  
OMIM614948   
Gene and transcription
Genbank (Entrez)AK024271 AK092776 AK126587 AK295839 AK303598
RefSeq transcript (Entrez)NM_001284401 NM_001321294 NM_001321295 NM_001366031 NM_001394474 NM_138807
Consensus coding sequences : CCDS (NCBI)TAMM41
Gene ExpressionTAMM41 [ NCBI-GEO ]   TAMM41 [ EBI - ARRAY_EXPRESS ]   TAMM41 [ SEEK ]   TAMM41 [ MEM ]
Gene Expression Viewer (FireBrowse)TAMM41 [ Firebrowse - Broad ]
GenevisibleExpression of TAMM41 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)132001
GTEX Portal (Tissue expression)TAMM41
Human Protein AtlasENSG00000144559-TAMM41 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96BW9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96BW9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96BW9
PhosPhoSitePlusQ96BW9
Domains : Interpro (EBI)Tam41   
Domain families : Pfam (Sanger)Tam41_Mmp37 (PF09139)   
Domain families : Pfam (NCBI)pfam09139   
Conserved Domain (NCBI)TAMM41
SuperfamilyQ96BW9
AlphaFold pdb e-kbQ96BW9   
Human Protein Atlas [tissue]ENSG00000144559-TAMM41 [tissue]
HPRD14452
Protein Interaction databases
DIP (DOE-UCLA)Q96BW9
IntAct (EBI)Q96BW9
BioGRIDTAMM41
STRING (EMBL)TAMM41
ZODIACTAMM41
Ontologies - Pathways
QuickGOQ96BW9
Ontology : AmiGOphosphatidate cytidylyltransferase activity  phosphatidate cytidylyltransferase activity  protein binding  mitochondrion  mitochondrial inner membrane  CDP-diacylglycerol biosynthetic process  CDP-diacylglycerol biosynthetic process  extrinsic component of membrane  extrinsic component of mitochondrial inner membrane  cardiolipin biosynthetic process  cardiolipin biosynthetic process  
Ontology : EGO-EBIphosphatidate cytidylyltransferase activity  phosphatidate cytidylyltransferase activity  protein binding  mitochondrion  mitochondrial inner membrane  CDP-diacylglycerol biosynthetic process  CDP-diacylglycerol biosynthetic process  extrinsic component of membrane  extrinsic component of mitochondrial inner membrane  cardiolipin biosynthetic process  cardiolipin biosynthetic process  
NDEx NetworkTAMM41
Atlas of Cancer Signalling NetworkTAMM41
Wikipedia pathwaysTAMM41
Orthology - Evolution
OrthoDB132001
GeneTree (enSembl)ENSG00000144559
Phylogenetic Trees/Animal Genes : TreeFamTAMM41
Homologs : HomoloGeneTAMM41
Homology/Alignments : Family Browser (UCSC)TAMM41
Gene fusions - Rearrangements
Fusion : QuiverTAMM41
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAMM41 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAMM41
dbVarTAMM41
ClinVarTAMM41
MonarchTAMM41
1000_GenomesTAMM41 
Exome Variant ServerTAMM41
GNOMAD BrowserENSG00000144559
Varsome BrowserTAMM41
ACMGTAMM41 variants
VarityQ96BW9
Genomic Variants (DGV)TAMM41 [DGVbeta]
DECIPHERTAMM41 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAMM41 
Mutations
ICGC Data PortalTAMM41 
TCGA Data PortalTAMM41 
Broad Tumor PortalTAMM41
OASIS PortalTAMM41 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAMM41  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTAMM41
Mutations and Diseases : HGMDTAMM41
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTAMM41
DgiDB (Drug Gene Interaction Database)TAMM41
DoCM (Curated mutations)TAMM41
CIViC (Clinical Interpretations of Variants in Cancer)TAMM41
Cancer3DTAMM41
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614948   
Orphanet
DisGeNETTAMM41
MedgenTAMM41
Genetic Testing Registry TAMM41
NextProtQ96BW9 [Medical]
GENETestsTAMM41
Target ValidationTAMM41
Huge Navigator TAMM41 [HugePedia]
ClinGenTAMM41
Clinical trials, drugs, therapy
MyCancerGenomeTAMM41
Protein Interactions : CTDTAMM41
Pharm GKB GenePA142672392
PharosQ96BW9
Clinical trialTAMM41
Miscellaneous
canSAR (ICR)TAMM41
HarmonizomeTAMM41
DataMed IndexTAMM41
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTAMM41
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:24:49 CEST 2021

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