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TAMM41 (TAM41 mitochondrial translocator assembly and maintenance homolog)

Identity

Alias_namesC3orf31
chromosome 3 open reading frame 31
TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
Alias_symbol (synonym)MGC16471
DKFZp434E0519
Other aliasRAM41
TAM41
HGNC (Hugo) TAMM41
LocusID (NCBI) 132001
Atlas_Id 74476
Location 3p25.2  [Link to chromosome band 3p25]
Location_base_pair Starts at 11790442 and ends at 11846919 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TAMM41 (3p25.2) / RAB1B (11q13.2)TAMM41 (3p25.2) / SGIP1 (1p31.3)VGLL4 (3p25.3) / TAMM41 (3p25.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TAMM41   25187
Cards
Entrez_Gene (NCBI)TAMM41  132001  TAM41 mitochondrial translocator assembly and maintenance homolog
AliasesC3orf31; RAM41; TAM41
GeneCards (Weizmann)TAMM41
Ensembl hg19 (Hinxton)ENSG00000144559 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144559 [Gene_View]  chr3:11790442-11846919 [Contig_View]  TAMM41 [Vega]
ICGC DataPortalENSG00000144559
TCGA cBioPortalTAMM41
AceView (NCBI)TAMM41
Genatlas (Paris)TAMM41
WikiGenes132001
SOURCE (Princeton)TAMM41
Genetics Home Reference (NIH)TAMM41
Genomic and cartography
GoldenPath hg38 (UCSC)TAMM41  -     chr3:11790442-11846919 -  3p25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAMM41  -     3p25.2   [Description]    (hg19-Feb_2009)
EnsemblTAMM41 - 3p25.2 [CytoView hg19]  TAMM41 - 3p25.2 [CytoView hg38]
Mapping of homologs : NCBITAMM41 [Mapview hg19]  TAMM41 [Mapview hg38]
OMIM614948   
Gene and transcription
Genbank (Entrez)AK024271 AK092776 AK126587 AK295839 AK303598
RefSeq transcript (Entrez)NM_001284401 NM_001321294 NM_001321295 NM_138807
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TAMM41
Cluster EST : UnigeneHs.475472 [ NCBI ]
CGAP (NCI)Hs.475472
Alternative Splicing GalleryENSG00000144559
Gene ExpressionTAMM41 [ NCBI-GEO ]   TAMM41 [ EBI - ARRAY_EXPRESS ]   TAMM41 [ SEEK ]   TAMM41 [ MEM ]
Gene Expression Viewer (FireBrowse)TAMM41 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)132001
GTEX Portal (Tissue expression)TAMM41
Human Protein AtlasENSG00000144559-TAMM41 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96BW9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96BW9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96BW9
Splice isoforms : SwissVarQ96BW9
Catalytic activity : Enzyme2.7.7.41 [ Enzyme-Expasy ]   2.7.7.412.7.7.41 [ IntEnz-EBI ]   2.7.7.41 [ BRENDA ]   2.7.7.41 [ KEGG ]   
PhosPhoSitePlusQ96BW9
Domains : Interpro (EBI)Mmp37   
Domain families : Pfam (Sanger)Mmp37 (PF09139)   
Domain families : Pfam (NCBI)pfam09139   
Conserved Domain (NCBI)TAMM41
DMDM Disease mutations132001
Blocks (Seattle)TAMM41
SuperfamilyQ96BW9
Human Protein Atlas [tissue]ENSG00000144559-TAMM41 [tissue]
Peptide AtlasQ96BW9
HPRD14452
IPIIPI00060287   IPI00908721   IPI00926705   IPI00925977   IPI00926424   IPI00925803   
Protein Interaction databases
DIP (DOE-UCLA)Q96BW9
IntAct (EBI)Q96BW9
FunCoupENSG00000144559
BioGRIDTAMM41
STRING (EMBL)TAMM41
ZODIACTAMM41
Ontologies - Pathways
QuickGOQ96BW9
Ontology : AmiGOphosphatidate cytidylyltransferase activity  CDP-diacylglycerol biosynthetic process  extrinsic component of mitochondrial inner membrane  cardiolipin biosynthetic process  
Ontology : EGO-EBIphosphatidate cytidylyltransferase activity  CDP-diacylglycerol biosynthetic process  extrinsic component of mitochondrial inner membrane  cardiolipin biosynthetic process  
NDEx NetworkTAMM41
Atlas of Cancer Signalling NetworkTAMM41
Wikipedia pathwaysTAMM41
Orthology - Evolution
OrthoDB132001
GeneTree (enSembl)ENSG00000144559
Phylogenetic Trees/Animal Genes : TreeFamTAMM41
HOVERGENQ96BW9
HOGENOMQ96BW9
Homologs : HomoloGeneTAMM41
Homology/Alignments : Family Browser (UCSC)TAMM41
Gene fusions - Rearrangements
Tumor Fusion PortalTAMM41
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAMM41 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAMM41
dbVarTAMM41
ClinVarTAMM41
1000_GenomesTAMM41 
Exome Variant ServerTAMM41
ExAC (Exome Aggregation Consortium)ENSG00000144559
GNOMAD BrowserENSG00000144559
Genetic variants : HAPMAP132001
Genomic Variants (DGV)TAMM41 [DGVbeta]
DECIPHERTAMM41 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAMM41 
Mutations
ICGC Data PortalTAMM41 
TCGA Data PortalTAMM41 
Broad Tumor PortalTAMM41
OASIS PortalTAMM41 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTAMM41
BioMutasearch TAMM41
DgiDB (Drug Gene Interaction Database)TAMM41
DoCM (Curated mutations)TAMM41 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TAMM41 (select a term)
intoGenTAMM41
Cancer3DTAMM41(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614948   
Orphanet
DisGeNETTAMM41
MedgenTAMM41
Genetic Testing Registry TAMM41
NextProtQ96BW9 [Medical]
TSGene132001
GENETestsTAMM41
Target ValidationTAMM41
Huge Navigator TAMM41 [HugePedia]
snp3D : Map Gene to Disease132001
BioCentury BCIQTAMM41
ClinGenTAMM41
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD132001
Chemical/Pharm GKB GenePA142672392
Clinical trialTAMM41
Miscellaneous
canSAR (ICR)TAMM41 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTAMM41
EVEXTAMM41
GoPubMedTAMM41
iHOPTAMM41
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:09:11 CET 2017

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