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TAPBP (TAP binding protein)

Identity

Alias (NCBI)NGS17
TAPA
TPN
TPSN
HGNC (Hugo) TAPBP
HGNC Alias symbTAPA
HGNC Alias nametapasin
HGNC Previous nameTAP binding protein (tapasin)
LocusID (NCBI) 6892
Atlas_Id 42470
Location 6p21.32  [Link to chromosome band 6p21]
Location_base_pair Starts at 33299695 and ends at 33314078 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CWF19L1 (10q24.31) / TAPBP (6p21.32)EEF2 (19p13.3) / TAPBP (6p21.32)INS-IGF2 (11p15.5) / TAPBP (6p21.32)
TAPBP (6p21.32) / DAXX (6p21.32)TRUB2 (9q34.11) / TAPBP (6p21.32)TAPBP 6p21.32 / DAXX 6p21.32

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TAPBP   11566
LRG (Locus Reference Genomic)LRG_114
Cards
Entrez_Gene (NCBI)TAPBP    TAP binding protein
AliasesNGS17; TAPA; TPN; TPSN
GeneCards (Weizmann)TAPBP
Ensembl hg19 (Hinxton)ENSG00000231925 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231925 [Gene_View]  ENSG00000231925 [Sequence]  chr6:33299695-33314078 [Contig_View]  TAPBP [Vega]
ICGC DataPortalENSG00000231925
TCGA cBioPortalTAPBP
AceView (NCBI)TAPBP
Genatlas (Paris)TAPBP
SOURCE (Princeton)TAPBP
Genetics Home Reference (NIH)TAPBP
Genomic and cartography
GoldenPath hg38 (UCSC)TAPBP  -     chr6:33299695-33314078 -  6p21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAPBP  -     6p21.32   [Description]    (hg19-Feb_2009)
GoldenPathTAPBP - 6p21.32 [CytoView hg19]  TAPBP - 6p21.32 [CytoView hg38]
ImmunoBaseENSG00000231925
Genome Data Viewer NCBITAPBP [Mapview hg19]  
OMIM601962   604571   
Gene and transcription
Genbank (Entrez)AB010639 AF009510 AF029750 AF067286 AF314222
RefSeq transcript (Entrez)NM_003190 NM_172208 NM_172209
Consensus coding sequences : CCDS (NCBI)TAPBP
Gene ExpressionTAPBP [ NCBI-GEO ]   TAPBP [ EBI - ARRAY_EXPRESS ]   TAPBP [ SEEK ]   TAPBP [ MEM ]
Gene Expression Viewer (FireBrowse)TAPBP [ Firebrowse - Broad ]
GenevisibleExpression of TAPBP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6892
GTEX Portal (Tissue expression)TAPBP
Human Protein AtlasENSG00000231925-TAPBP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TAPBP
Human Protein Atlas [tissue]ENSG00000231925-TAPBP [tissue]
HPRD09061
Protein Interaction databases
BioGRIDTAPBP
STRING (EMBL)TAPBP
ZODIACTAPBP
Ontologies - Pathways
Litterature
PubMed105 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTAPBP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:34:14 CEST 2021

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