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TARID (TCF21 antisense RNA inducing promoter demethylation)

Identity

Alias_namesEYA4-AS1
EYA4 antisense RNA 1
Other alias
HGNC (Hugo) TARID
LocusID (NCBI) 100507308
Atlas_Id 74479
Location 6q23.2  [Link to chromosome band 6q23]
Location_base_pair Starts at 133502252 and ends at 133889006 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TARID   50506
Cards
Entrez_Gene (NCBI)TARID  100507308  TCF21 antisense RNA inducing promoter demethylation
AliasesEYA4-AS1
GeneCards (Weizmann)TARID
Ensembl hg19 (Hinxton)ENSG00000227954 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227954 [Gene_View]  ENSG00000227954 [Sequence]  chr6:133502252-133889006 [Contig_View]  TARID [Vega]
ICGC DataPortalENSG00000227954
TCGA cBioPortalTARID
AceView (NCBI)TARID
Genatlas (Paris)TARID
WikiGenes100507308
SOURCE (Princeton)TARID
Genetics Home Reference (NIH)TARID
Genomic and cartography
GoldenPath hg38 (UCSC)TARID  -     chr6:133502252-133889006 -  6q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TARID  -     6q23.2   [Description]    (hg19-Feb_2009)
EnsemblTARID - 6q23.2 [CytoView hg19]  TARID - 6q23.2 [CytoView hg38]
Mapping of homologs : NCBITARID [Mapview hg19]  TARID [Mapview hg38]
OMIM616058   
Gene and transcription
Genbank (Entrez)AK093513 BC041459 BQ009762 DA836644 DB063930
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TARID
Cluster EST : UnigeneHs.665572 [ NCBI ]
CGAP (NCI)Hs.665572
Alternative Splicing GalleryENSG00000227954
Gene ExpressionTARID [ NCBI-GEO ]   TARID [ EBI - ARRAY_EXPRESS ]   TARID [ SEEK ]   TARID [ MEM ]
Gene Expression Viewer (FireBrowse)TARID [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507308
GTEX Portal (Tissue expression)TARID
Human Protein AtlasENSG00000227954-TARID [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TARID
DMDM Disease mutations100507308
Blocks (Seattle)TARID
Human Protein Atlas [tissue]ENSG00000227954-TARID [tissue]
Protein Interaction databases
FunCoupENSG00000227954
BioGRIDTARID
STRING (EMBL)TARID
ZODIACTARID
Ontologies - Pathways
Huge Navigator TARID [HugePedia]
snp3D : Map Gene to Disease100507308
BioCentury BCIQTARID
ClinGenTARID
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507308
Clinical trialTARID
Miscellaneous
canSAR (ICR)TARID (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTARID
EVEXTARID
GoPubMedTARID
iHOPTARID
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:34:02 CEST 2018

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