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TARP (TCR gamma alternate reading frame protein)

Identity

Other namesCD3G
TCRG
TCRGC1
TCRGC2
HGNC (Hugo) -
LocusID (NCBI) 445347
Location 7p14.1
Location_base_pair Starts at 38299244 and ends at 38313248 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)-   -
Entrez_Gene (NCBI)TARP  445347  TCR gamma alternate reading frame protein
Cards
GeneCards (Weizmann)TARP
Ensembl (Hinxton) [Gene_View]  chr7:38299244-38313248 [Contig_View]  TARP [Vega]
AceView (NCBI)TARP
Genatlas (Paris)TARP
SOURCE (Stanford)NM_001003799 NM_001003806
Genomic and cartography
GoldenPath (UCSC)TARP  -  7p14.1   chr7:38299244-38313248 -  7p14.1   [Description]    (hg19-Feb_2009)
EnsemblTARP - 7p14.1 [CytoView]
Mapping of homologs : NCBITARP [Mapview]
OMIM609642   
Gene and transcription
Genbank (Entrez)AF151103 BC017861 BC030554 BC105589 BF674593
RefSeq transcript (SRS)NM_001003799 NM_001003806
RefSeq transcript (Entrez)NM_001003799 NM_001003806
RefSeq genomic (SRS)AC_000068 AC_000139 NC_000007 NC_018918 NG_001336 NG_029035 NT_007819 NT_079592 NW_001839003 NW_004078029
RefSeq genomic (Entrez)AC_000068 AC_000139 NC_000007 NC_018918 NG_001336 NG_029035 NT_007819 NT_079592 NW_001839003 NW_004078029
Consensus coding sequences : CCDS (NCBI)TARP
Cluster EST : UnigeneHs.731375 [ SRS ] Hs.731375 [ NCBI ]
CGAP (NCI)Hs.731375
Gene ExpressionTARP [ NCBI-GEO ]   TARP [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
Domain families : Pfam (SRS)
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM445347
HPRD15468
IPIIPI00465190   IPI00983559   
Protein Interaction databases
REACTOMETARP
Protein Interaction Database445347
BioGRIDTARP
IntegromeDBTARP
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)TARP
SNP (GeneSNP Utah)TARP
SNP : HGBaseTARP
Genetic variants : HAPMAPTARP
Mutations and Diseases : HGMD-
OMIM609642   
GENETests609642   
Disease Genetic Association-
Huge Navigator - [HugePedia]  - [HugeCancerGEM]
Genomic VariantsTARP  TARP [DGVbeta]
snp3D : Map Gene to Disease445347
General knowledge
Homologs : HomoloGeneTARP
Homology/Alignments : Family Browser (UCSC)TARP
Phylogenetic Trees/Animal Genes : TreeFam-
Chemical/Protein Interactions : CTD445347
Clinical trialTARP
Ontology : AmiGO
Ontology : EGO-EBI
Other databases
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
PubGeneTARP
iHOPTARP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:37:21 CEST 2013
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jlhuret@AtlasGeneticsOncology.org.