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TARP (TCR gamma alternate reading frame protein)

Identity

Alias (NCBI)CD3G
TCRG
TCRGC1
TCRGC2
TCRGV
HGNC (Hugo) -
LocusID (NCBI) 445347
Atlas_Id 51567
Location 7p14.1  [Link to chromosome band 7p14]
Location_base_pair Starts at 38259643 and ends at 38273647 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)TARP    TCR gamma alternate reading frame protein
AliasesCD3G; TCRG; TCRGC1; TCRGC2; 
TCRGV
GeneCards (Weizmann)TARP
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr7:38259643-38273647 [Contig_View]  TARP [Vega]
TCGA cBioPortalTARP
AceView (NCBI)TARP
Genatlas (Paris)TARP
SOURCE (Princeton)TARP
Genetics Home Reference (NIH)TARP
Genomic and cartography
GoldenPath hg38 (UCSC)TARP  -     chr7:38259643-38273647 -  7p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TARP  -     7p14.1   [Description]    (hg19-Feb_2009)
GoldenPathTARP - 7p14.1 [CytoView hg19]  TARP - 7p14.1 [CytoView hg38]
Genome Data Viewer NCBITARP [Mapview hg19]  
OMIM609642   
Gene and transcription
Genbank (Entrez)AF151103 AF512447 AF512448 AF512449 AF512450
RefSeq transcript (Entrez)NM_001003799 NM_001003806
Consensus coding sequences : CCDS (NCBI)TARP
Gene ExpressionTARP [ NCBI-GEO ]   TARP [ EBI - ARRAY_EXPRESS ]   TARP [ SEEK ]   TARP [ MEM ]
Gene Expression Viewer (FireBrowse)TARP [ Firebrowse - Broad ]
GenevisibleExpression of TARP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)445347
GTEX Portal (Tissue expression)TARP
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TARP
HPRD15468
Protein Interaction databases
BioGRIDTARP
STRING (EMBL)TARP
ZODIACTARP
Ontologies - Pathways
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTARP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:34:16 CEST 2021

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