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TAS2R1 (taste 2 receptor member 1)

Identity

Alias (NCBI)T2R1
TRB7
HGNC (Hugo) TAS2R1
HGNC Alias symbT2R1
TRB7
HGNC Previous nametaste receptor, type 2, member 1
LocusID (NCBI) 50834
Atlas_Id 54686
Location 5p15.31  [Link to chromosome band 5p15]
Location_base_pair Starts at 9627347 and ends at 9630351 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NIPBL (5p13.2) / TAS2R1 (5p15.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TAS2R1   14909
Cards
Entrez_Gene (NCBI)TAS2R1    taste 2 receptor member 1
AliasesT2R1; TRB7
GeneCards (Weizmann)TAS2R1
Ensembl hg19 (Hinxton)ENSG00000169777 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000169777 [Gene_View]  ENSG00000169777 [Sequence]  chr5:9627347-9630351 [Contig_View]  TAS2R1 [Vega]
ICGC DataPortalENSG00000169777
TCGA cBioPortalTAS2R1
AceView (NCBI)TAS2R1
Genatlas (Paris)TAS2R1
SOURCE (Princeton)TAS2R1
Genetics Home Reference (NIH)TAS2R1
Genomic and cartography
GoldenPath hg38 (UCSC)TAS2R1  -     chr5:9627347-9630351 -  5p15.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAS2R1  -     5p15.31   [Description]    (hg19-Feb_2009)
GoldenPathTAS2R1 - 5p15.31 [CytoView hg19]  TAS2R1 - 5p15.31 [CytoView hg38]
ImmunoBaseENSG00000169777
Genome Data Viewer NCBITAS2R1 [Mapview hg19]  
OMIM604796   
Gene and transcription
Genbank (Entrez)BC095521 BC101729 BC101731
RefSeq transcript (Entrez)NM_001386348 NM_019599
Consensus coding sequences : CCDS (NCBI)TAS2R1
Gene ExpressionTAS2R1 [ NCBI-GEO ]   TAS2R1 [ EBI - ARRAY_EXPRESS ]   TAS2R1 [ SEEK ]   TAS2R1 [ MEM ]
Gene Expression Viewer (FireBrowse)TAS2R1 [ Firebrowse - Broad ]
GenevisibleExpression of TAS2R1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)50834
GTEX Portal (Tissue expression)TAS2R1
Human Protein AtlasENSG00000169777-TAS2R1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NYW7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NYW7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NYW7
PhosPhoSitePlusQ9NYW7
Domains : Interpro (EBI)TAS2R   
Domain families : Pfam (Sanger)TAS2R (PF05296)   
Domain families : Pfam (NCBI)pfam05296   
Conserved Domain (NCBI)TAS2R1
SuperfamilyQ9NYW7
AlphaFold pdb e-kbQ9NYW7   
Human Protein Atlas [tissue]ENSG00000169777-TAS2R1 [tissue]
HPRD07267
Protein Interaction databases
DIP (DOE-UCLA)Q9NYW7
IntAct (EBI)Q9NYW7
BioGRIDTAS2R1
STRING (EMBL)TAS2R1
ZODIACTAS2R1
Ontologies - Pathways
QuickGOQ9NYW7
Ontology : AmiGOdetection of chemical stimulus involved in sensory perception of bitter taste  detection of chemical stimulus involved in sensory perception of bitter taste  G protein-coupled receptor activity  plasma membrane  G protein-coupled receptor signaling pathway  taste receptor activity  integral component of membrane  integral component of membrane  bitter taste receptor activity  bitter taste receptor activity  
Ontology : EGO-EBIdetection of chemical stimulus involved in sensory perception of bitter taste  detection of chemical stimulus involved in sensory perception of bitter taste  G protein-coupled receptor activity  plasma membrane  G protein-coupled receptor signaling pathway  taste receptor activity  integral component of membrane  integral component of membrane  bitter taste receptor activity  bitter taste receptor activity  
Pathways : KEGGTaste transduction   
NDEx NetworkTAS2R1
Atlas of Cancer Signalling NetworkTAS2R1
Wikipedia pathwaysTAS2R1
Orthology - Evolution
OrthoDB50834
GeneTree (enSembl)ENSG00000169777
Phylogenetic Trees/Animal Genes : TreeFamTAS2R1
Homologs : HomoloGeneTAS2R1
Homology/Alignments : Family Browser (UCSC)TAS2R1
Gene fusions - Rearrangements
Fusion : MitelmanNIPBL/TAS2R1 [5p13.2/5p15.31]  
Fusion : QuiverTAS2R1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAS2R1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAS2R1
dbVarTAS2R1
ClinVarTAS2R1
MonarchTAS2R1
1000_GenomesTAS2R1 
Exome Variant ServerTAS2R1
GNOMAD BrowserENSG00000169777
Varsome BrowserTAS2R1
ACMGTAS2R1 variants
VarityQ9NYW7
Genomic Variants (DGV)TAS2R1 [DGVbeta]
DECIPHERTAS2R1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAS2R1 
Mutations
ICGC Data PortalTAS2R1 
TCGA Data PortalTAS2R1 
Broad Tumor PortalTAS2R1
OASIS PortalTAS2R1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAS2R1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTAS2R1
Mutations and Diseases : HGMDTAS2R1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTAS2R1
DgiDB (Drug Gene Interaction Database)TAS2R1
DoCM (Curated mutations)TAS2R1
CIViC (Clinical Interpretations of Variants in Cancer)TAS2R1
Cancer3DTAS2R1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604796   
Orphanet
DisGeNETTAS2R1
MedgenTAS2R1
Genetic Testing Registry TAS2R1
NextProtQ9NYW7 [Medical]
GENETestsTAS2R1
Target ValidationTAS2R1
Huge Navigator TAS2R1 [HugePedia]
ClinGenTAS2R1
Clinical trials, drugs, therapy
MyCancerGenomeTAS2R1
Protein Interactions : CTDTAS2R1
Pharm GKB GenePA37921
PharosQ9NYW7
Clinical trialTAS2R1
Miscellaneous
canSAR (ICR)TAS2R1
HarmonizomeTAS2R1
DataMed IndexTAS2R1
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTAS2R1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:34:16 CEST 2021

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