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TAS2R13 (taste 2 receptor member 13)

Identity

Alias (NCBI)T2R13
TRB3
HGNC (Hugo) TAS2R13
HGNC Alias symbT2R13
TRB3
HGNC Previous nametaste receptor, type 2, member 13
LocusID (NCBI) 50838
Atlas_Id 74488
Location 12p13.2  [Link to chromosome band 12p13]
Location_base_pair Starts at 10907926 and ends at 10909562 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TAS2R13   14919
Cards
Entrez_Gene (NCBI)TAS2R13    taste 2 receptor member 13
AliasesT2R13; TRB3
GeneCards (Weizmann)TAS2R13
Ensembl hg19 (Hinxton)ENSG00000212128 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000212128 [Gene_View]  ENSG00000212128 [Sequence]  chr12:10907926-10909562 [Contig_View]  TAS2R13 [Vega]
ICGC DataPortalENSG00000212128
TCGA cBioPortalTAS2R13
AceView (NCBI)TAS2R13
Genatlas (Paris)TAS2R13
SOURCE (Princeton)TAS2R13
Genetics Home Reference (NIH)TAS2R13
Genomic and cartography
GoldenPath hg38 (UCSC)TAS2R13  -     chr12:10907926-10909562 -  12p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAS2R13  -     12p13.2   [Description]    (hg19-Feb_2009)
GoldenPathTAS2R13 - 12p13.2 [CytoView hg19]  TAS2R13 - 12p13.2 [CytoView hg38]
ImmunoBaseENSG00000212128
Genome Data Viewer NCBITAS2R13 [Mapview hg19]  
OMIM604792   
Gene and transcription
Genbank (Entrez)BC069376 BC095518 BC115402 BC115403
RefSeq transcript (Entrez)NM_023920
Consensus coding sequences : CCDS (NCBI)TAS2R13
Gene ExpressionTAS2R13 [ NCBI-GEO ]   TAS2R13 [ EBI - ARRAY_EXPRESS ]   TAS2R13 [ SEEK ]   TAS2R13 [ MEM ]
Gene Expression Viewer (FireBrowse)TAS2R13 [ Firebrowse - Broad ]
GenevisibleExpression of TAS2R13 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)50838
GTEX Portal (Tissue expression)TAS2R13
Human Protein AtlasENSG00000212128-TAS2R13 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NYV9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NYV9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NYV9
PhosPhoSitePlusQ9NYV9
Domains : Interpro (EBI)TAS2R   
Domain families : Pfam (Sanger)TAS2R (PF05296)   
Domain families : Pfam (NCBI)pfam05296   
Conserved Domain (NCBI)TAS2R13
SuperfamilyQ9NYV9
AlphaFold pdb e-kbQ9NYV9   
Human Protein Atlas [tissue]ENSG00000212128-TAS2R13 [tissue]
HPRD11991
Protein Interaction databases
DIP (DOE-UCLA)Q9NYV9
IntAct (EBI)Q9NYV9
BioGRIDTAS2R13
STRING (EMBL)TAS2R13
ZODIACTAS2R13
Ontologies - Pathways
QuickGOQ9NYV9
Ontology : AmiGOdetection of chemical stimulus involved in sensory perception of bitter taste  detection of chemical stimulus involved in sensory perception of bitter taste  G protein-coupled receptor activity  plasma membrane  G protein-coupled receptor signaling pathway  taste receptor activity  integral component of membrane  integral component of membrane  positive regulation of cytokinesis  bitter taste receptor activity  bitter taste receptor activity  
Ontology : EGO-EBIdetection of chemical stimulus involved in sensory perception of bitter taste  detection of chemical stimulus involved in sensory perception of bitter taste  G protein-coupled receptor activity  plasma membrane  G protein-coupled receptor signaling pathway  taste receptor activity  integral component of membrane  integral component of membrane  positive regulation of cytokinesis  bitter taste receptor activity  bitter taste receptor activity  
Pathways : KEGGTaste transduction   
NDEx NetworkTAS2R13
Atlas of Cancer Signalling NetworkTAS2R13
Wikipedia pathwaysTAS2R13
Orthology - Evolution
OrthoDB50838
GeneTree (enSembl)ENSG00000212128
Phylogenetic Trees/Animal Genes : TreeFamTAS2R13
Homologs : HomoloGeneTAS2R13
Homology/Alignments : Family Browser (UCSC)TAS2R13
Gene fusions - Rearrangements
Fusion : QuiverTAS2R13
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAS2R13 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAS2R13
dbVarTAS2R13
ClinVarTAS2R13
MonarchTAS2R13
1000_GenomesTAS2R13 
Exome Variant ServerTAS2R13
GNOMAD BrowserENSG00000212128
Varsome BrowserTAS2R13
ACMGTAS2R13 variants
VarityQ9NYV9
Genomic Variants (DGV)TAS2R13 [DGVbeta]
DECIPHERTAS2R13 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAS2R13 
Mutations
ICGC Data PortalTAS2R13 
TCGA Data PortalTAS2R13 
Broad Tumor PortalTAS2R13
OASIS PortalTAS2R13 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAS2R13  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTAS2R13
Mutations and Diseases : HGMDTAS2R13
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTAS2R13
DgiDB (Drug Gene Interaction Database)TAS2R13
DoCM (Curated mutations)TAS2R13
CIViC (Clinical Interpretations of Variants in Cancer)TAS2R13
Cancer3DTAS2R13
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604792   
Orphanet
DisGeNETTAS2R13
MedgenTAS2R13
Genetic Testing Registry TAS2R13
NextProtQ9NYV9 [Medical]
GENETestsTAS2R13
Target ValidationTAS2R13
Huge Navigator TAS2R13 [HugePedia]
ClinGenTAS2R13
Clinical trials, drugs, therapy
MyCancerGenomeTAS2R13
Protein Interactions : CTDTAS2R13
Pharm GKB GenePA37929
PharosQ9NYV9
Clinical trialTAS2R13
Miscellaneous
canSAR (ICR)TAS2R13
HarmonizomeTAS2R13
DataMed IndexTAS2R13
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTAS2R13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:24:51 CEST 2021

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