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TAS2R16 (taste 2 receptor member 16)

Identity

Alias_namestaste receptor, type 2, member 16
Alias_symbol (synonym)T2R16
Other alias
HGNC (Hugo) TAS2R16
LocusID (NCBI) 50833
Atlas_Id 74489
Location 7q31.32  [Link to chromosome band 7q31]
Location_base_pair Starts at 122994705 and ends at 122995700 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TAS2R16   14921
Cards
Entrez_Gene (NCBI)TAS2R16  50833  taste 2 receptor member 16
AliasesT2R16
GeneCards (Weizmann)TAS2R16
Ensembl hg19 (Hinxton)ENSG00000128519 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000128519 [Gene_View]  chr7:122994705-122995700 [Contig_View]  TAS2R16 [Vega]
ICGC DataPortalENSG00000128519
TCGA cBioPortalTAS2R16
AceView (NCBI)TAS2R16
Genatlas (Paris)TAS2R16
WikiGenes50833
SOURCE (Princeton)TAS2R16
Genetics Home Reference (NIH)TAS2R16
Genomic and cartography
GoldenPath hg38 (UCSC)TAS2R16  -     chr7:122994705-122995700 -  7q31.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAS2R16  -     7q31.32   [Description]    (hg19-Feb_2009)
EnsemblTAS2R16 - 7q31.32 [CytoView hg19]  TAS2R16 - 7q31.32 [CytoView hg38]
Mapping of homologs : NCBITAS2R16 [Mapview hg19]  TAS2R16 [Mapview hg38]
OMIM103780   604867   
Gene and transcription
Genbank (Entrez)BC095524
RefSeq transcript (Entrez)NM_016945
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TAS2R16
Cluster EST : UnigeneHs.272395 [ NCBI ]
CGAP (NCI)Hs.272395
Alternative Splicing GalleryENSG00000128519
Gene ExpressionTAS2R16 [ NCBI-GEO ]   TAS2R16 [ EBI - ARRAY_EXPRESS ]   TAS2R16 [ SEEK ]   TAS2R16 [ MEM ]
Gene Expression Viewer (FireBrowse)TAS2R16 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)50833
GTEX Portal (Tissue expression)TAS2R16
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NYV7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NYV7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NYV7
Splice isoforms : SwissVarQ9NYV7
PhosPhoSitePlusQ9NYV7
Domains : Interpro (EBI)T2R   
Domain families : Pfam (Sanger)TAS2R (PF05296)   
Domain families : Pfam (NCBI)pfam05296   
Conserved Domain (NCBI)TAS2R16
DMDM Disease mutations50833
Blocks (Seattle)TAS2R16
SuperfamilyQ9NYV7
Human Protein AtlasENSG00000128519
Peptide AtlasQ9NYV7
HPRD05334
IPIIPI00027216   
Protein Interaction databases
DIP (DOE-UCLA)Q9NYV7
IntAct (EBI)Q9NYV7
FunCoupENSG00000128519
BioGRIDTAS2R16
STRING (EMBL)TAS2R16
ZODIACTAS2R16
Ontologies - Pathways
QuickGOQ9NYV7
Ontology : AmiGOdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  protein binding  endoplasmic reticulum  trans-Golgi network  plasma membrane  G-protein coupled receptor signaling pathway  external side of plasma membrane  integral component of membrane  bitter taste receptor activity  
Ontology : EGO-EBIdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  protein binding  endoplasmic reticulum  trans-Golgi network  plasma membrane  G-protein coupled receptor signaling pathway  external side of plasma membrane  integral component of membrane  bitter taste receptor activity  
Pathways : KEGGTaste transduction   
NDEx NetworkTAS2R16
Atlas of Cancer Signalling NetworkTAS2R16
Wikipedia pathwaysTAS2R16
Orthology - Evolution
OrthoDB50833
GeneTree (enSembl)ENSG00000128519
Phylogenetic Trees/Animal Genes : TreeFamTAS2R16
HOVERGENQ9NYV7
HOGENOMQ9NYV7
Homologs : HomoloGeneTAS2R16
Homology/Alignments : Family Browser (UCSC)TAS2R16
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAS2R16 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAS2R16
dbVarTAS2R16
ClinVarTAS2R16
1000_GenomesTAS2R16 
Exome Variant ServerTAS2R16
ExAC (Exome Aggregation Consortium)TAS2R16 (select the gene name)
Genetic variants : HAPMAP50833
Genomic Variants (DGV)TAS2R16 [DGVbeta]
DECIPHERTAS2R16 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAS2R16 
Mutations
ICGC Data PortalTAS2R16 
TCGA Data PortalTAS2R16 
Broad Tumor PortalTAS2R16
OASIS PortalTAS2R16 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAS2R16  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTAS2R16
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TAS2R16
DgiDB (Drug Gene Interaction Database)TAS2R16
DoCM (Curated mutations)TAS2R16 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TAS2R16 (select a term)
intoGenTAS2R16
Cancer3DTAS2R16(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM103780    604867   
Orphanet
MedgenTAS2R16
Genetic Testing Registry TAS2R16
NextProtQ9NYV7 [Medical]
TSGene50833
GENETestsTAS2R16
Target ValidationTAS2R16
Huge Navigator TAS2R16 [HugePedia]
snp3D : Map Gene to Disease50833
BioCentury BCIQTAS2R16
ClinGenTAS2R16
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD50833
Chemical/Pharm GKB GenePA37931
Clinical trialTAS2R16
Miscellaneous
canSAR (ICR)TAS2R16 (select the gene name)
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTAS2R16
EVEXTAS2R16
GoPubMedTAS2R16
iHOPTAS2R16
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:44:52 CEST 2017

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