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TAS2R19 (taste receptor, type 2, member 19)

Identity

Alias_namesTAS2R48
TAS2R23
taste receptor, type 2, member 48
taste receptor, type 2, member 23
taste receptor, type 2, member 19
Alias_symbol (synonym)T2R19
T2R23
Other aliasMSTP058
T2R48
HGNC (Hugo) TAS2R19
LocusID (NCBI) 259294
Atlas_Id 74490
Location 12p13.2  [Link to chromosome band 12p13]
Location_base_pair Starts at 11174218 and ends at 11175219 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TAS2R19   19108
Cards
Entrez_Gene (NCBI)TAS2R19  259294  taste receptor, type 2, member 19
AliasesMSTP058; T2R19; T2R23; T2R48; 
TAS2R23; TAS2R48
GeneCards (Weizmann)TAS2R19
Ensembl hg19 (Hinxton)ENSG00000212124 [Gene_View]  chr12:11174218-11175219 [Contig_View]  TAS2R19 [Vega]
Ensembl hg38 (Hinxton)ENSG00000212124 [Gene_View]  chr12:11174218-11175219 [Contig_View]  TAS2R19 [Vega]
ICGC DataPortalENSG00000212124
TCGA cBioPortalTAS2R19
AceView (NCBI)TAS2R19
Genatlas (Paris)TAS2R19
WikiGenes259294
SOURCE (Princeton)TAS2R19
Genetics Home Reference (NIH)TAS2R19
Genomic and cartography
GoldenPath hg19 (UCSC)TAS2R19  -     chr12:11174218-11175219 -  12p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TAS2R19  -     12p13.2   [Description]    (hg38-Dec_2013)
EnsemblTAS2R19 - 12p13.2 [CytoView hg19]  TAS2R19 - 12p13.2 [CytoView hg38]
Mapping of homologs : NCBITAS2R19 [Mapview hg19]  TAS2R19 [Mapview hg38]
OMIM613961   
Gene and transcription
Genbank (Entrez)AF116728 BC101804 BC111998
RefSeq transcript (Entrez)NM_176888
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_009714 NT_187658 NW_003571050 NW_004929383
Consensus coding sequences : CCDS (NCBI)TAS2R19
Cluster EST : UnigeneHs.688196 [ NCBI ]
CGAP (NCI)Hs.688196
Alternative Splicing GalleryENSG00000212124
Gene ExpressionTAS2R19 [ NCBI-GEO ]   TAS2R19 [ EBI - ARRAY_EXPRESS ]   TAS2R19 [ SEEK ]   TAS2R19 [ MEM ]
Gene Expression Viewer (FireBrowse)TAS2R19 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)259294
GTEX Portal (Tissue expression)TAS2R19
Protein : pattern, domain, 3D structure
UniProt/SwissProtP59542   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP59542  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP59542
Splice isoforms : SwissVarP59542
PhosPhoSitePlusP59542
Domains : Interpro (EBI)T2R   
Domain families : Pfam (Sanger)TAS2R (PF05296)   
Domain families : Pfam (NCBI)pfam05296   
Conserved Domain (NCBI)TAS2R19
DMDM Disease mutations259294
Blocks (Seattle)TAS2R19
SuperfamilyP59542
Human Protein AtlasENSG00000212124
Peptide AtlasP59542
HPRD18156
IPIIPI00259673   IPI00847315   
Protein Interaction databases
DIP (DOE-UCLA)P59542
IntAct (EBI)P59542
FunCoupENSG00000212124
BioGRIDTAS2R19
STRING (EMBL)TAS2R19
ZODIACTAS2R19
Ontologies - Pathways
QuickGOP59542
Ontology : AmiGOdetection of chemical stimulus involved in sensory perception of bitter taste  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  bitter taste receptor activity  
Ontology : EGO-EBIdetection of chemical stimulus involved in sensory perception of bitter taste  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  bitter taste receptor activity  
Pathways : KEGGTaste transduction   
NDEx NetworkTAS2R19
Atlas of Cancer Signalling NetworkTAS2R19
Wikipedia pathwaysTAS2R19
Orthology - Evolution
OrthoDB259294
GeneTree (enSembl)ENSG00000212124
Phylogenetic Trees/Animal Genes : TreeFamTAS2R19
HOVERGENP59542
HOGENOMP59542
Homologs : HomoloGeneTAS2R19
Homology/Alignments : Family Browser (UCSC)TAS2R19
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAS2R19 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAS2R19
dbVarTAS2R19
ClinVarTAS2R19
1000_GenomesTAS2R19 
Exome Variant ServerTAS2R19
ExAC (Exome Aggregation Consortium)TAS2R19 (select the gene name)
Genetic variants : HAPMAP259294
Genomic Variants (DGV)TAS2R19 [DGVbeta]
DECIPHER (Syndromes)12:11174218-11175219  ENSG00000212124
CONAN: Copy Number AnalysisTAS2R19 
Mutations
ICGC Data PortalTAS2R19 
TCGA Data PortalTAS2R19 
Broad Tumor PortalTAS2R19
OASIS PortalTAS2R19 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAS2R19  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTAS2R19
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TAS2R19
DgiDB (Drug Gene Interaction Database)TAS2R19
DoCM (Curated mutations)TAS2R19 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TAS2R19 (select a term)
intoGenTAS2R19
Cancer3DTAS2R19(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613961   
Orphanet
MedgenTAS2R19
Genetic Testing Registry TAS2R19
NextProtP59542 [Medical]
TSGene259294
GENETestsTAS2R19
Huge Navigator TAS2R19 [HugePedia]
snp3D : Map Gene to Disease259294
BioCentury BCIQTAS2R19
ClinGenTAS2R19
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD259294
Chemical/Pharm GKB GenePA134932609
Clinical trialTAS2R19
Miscellaneous
canSAR (ICR)TAS2R19 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTAS2R19
EVEXTAS2R19
GoPubMedTAS2R19
iHOPTAS2R19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:47:26 CET 2017

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