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TAS2R20 (taste 2 receptor member 20)

Identity

Alias (NCBI)T2R20
T2R49
T2R56
TAS2R49
HGNC (Hugo) TAS2R20
HGNC Alias symbT2R20
T2R56
HGNC Previous nameTAS2R49
HGNC Previous nametaste receptor, type 2, member 49
 taste receptor, type 2, member 20
LocusID (NCBI) 259295
Atlas_Id 74491
Location 12p13.2  [Link to chromosome band 12p13]
Location_base_pair Starts at 10995962 and ends at 10998304 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TAS2R20   19109
Cards
Entrez_Gene (NCBI)TAS2R20    taste 2 receptor member 20
AliasesT2R20; T2R49; T2R56; TAS2R49
GeneCards (Weizmann)TAS2R20
Ensembl hg19 (Hinxton)ENSG00000255837 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255837 [Gene_View]  ENSG00000255837 [Sequence]  chr12:10995962-10998304 [Contig_View]  TAS2R20 [Vega]
ICGC DataPortalENSG00000255837
TCGA cBioPortalTAS2R20
AceView (NCBI)TAS2R20
Genatlas (Paris)TAS2R20
SOURCE (Princeton)TAS2R20
Genetics Home Reference (NIH)TAS2R20
Genomic and cartography
GoldenPath hg38 (UCSC)TAS2R20  -     chr12:10995962-10998304 -  12p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAS2R20  -     12p13.2   [Description]    (hg19-Feb_2009)
GoldenPathTAS2R20 - 12p13.2 [CytoView hg19]  TAS2R20 - 12p13.2 [CytoView hg38]
ImmunoBaseENSG00000255837
Genome Data Viewer NCBITAS2R20 [Mapview hg19]  
OMIM613962   
Gene and transcription
Genbank (Entrez)BC100915 BC100916 BC100917 BC100918 BC113843
RefSeq transcript (Entrez)NM_176889
Consensus coding sequences : CCDS (NCBI)TAS2R20
Gene ExpressionTAS2R20 [ NCBI-GEO ]   TAS2R20 [ EBI - ARRAY_EXPRESS ]   TAS2R20 [ SEEK ]   TAS2R20 [ MEM ]
Gene Expression Viewer (FireBrowse)TAS2R20 [ Firebrowse - Broad ]
GenevisibleExpression of TAS2R20 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)259295
GTEX Portal (Tissue expression)TAS2R20
Human Protein AtlasENSG00000255837-TAS2R20 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP59543   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP59543  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP59543
PhosPhoSitePlusP59543
Domains : Interpro (EBI)TAS2R   
Domain families : Pfam (Sanger)TAS2R (PF05296)   
Domain families : Pfam (NCBI)pfam05296   
Conserved Domain (NCBI)TAS2R20
SuperfamilyP59543
AlphaFold pdb e-kbP59543   
Human Protein Atlas [tissue]ENSG00000255837-TAS2R20 [tissue]
HPRD18157
Protein Interaction databases
DIP (DOE-UCLA)P59543
IntAct (EBI)P59543
BioGRIDTAS2R20
STRING (EMBL)TAS2R20
ZODIACTAS2R20
Ontologies - Pathways
QuickGOP59543
Ontology : AmiGOdetection of chemical stimulus involved in sensory perception of bitter taste  G protein-coupled receptor activity  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  bitter taste receptor activity  
Ontology : EGO-EBIdetection of chemical stimulus involved in sensory perception of bitter taste  G protein-coupled receptor activity  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  bitter taste receptor activity  
Pathways : KEGGTaste transduction   
NDEx NetworkTAS2R20
Atlas of Cancer Signalling NetworkTAS2R20
Wikipedia pathwaysTAS2R20
Orthology - Evolution
OrthoDB259295
GeneTree (enSembl)ENSG00000255837
Phylogenetic Trees/Animal Genes : TreeFamTAS2R20
Homologs : HomoloGeneTAS2R20
Homology/Alignments : Family Browser (UCSC)TAS2R20
Gene fusions - Rearrangements
Fusion : QuiverTAS2R20
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAS2R20 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAS2R20
dbVarTAS2R20
ClinVarTAS2R20
MonarchTAS2R20
1000_GenomesTAS2R20 
Exome Variant ServerTAS2R20
GNOMAD BrowserENSG00000255837
Varsome BrowserTAS2R20
ACMGTAS2R20 variants
VarityP59543
Genomic Variants (DGV)TAS2R20 [DGVbeta]
DECIPHERTAS2R20 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAS2R20 
Mutations
ICGC Data PortalTAS2R20 
TCGA Data PortalTAS2R20 
Broad Tumor PortalTAS2R20
OASIS PortalTAS2R20 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAS2R20  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTAS2R20
Mutations and Diseases : HGMDTAS2R20
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTAS2R20
DgiDB (Drug Gene Interaction Database)TAS2R20
DoCM (Curated mutations)TAS2R20
CIViC (Clinical Interpretations of Variants in Cancer)TAS2R20
Cancer3DTAS2R20
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613962   
Orphanet
DisGeNETTAS2R20
MedgenTAS2R20
Genetic Testing Registry TAS2R20
NextProtP59543 [Medical]
GENETestsTAS2R20
Target ValidationTAS2R20
Huge Navigator TAS2R20 [HugePedia]
ClinGenTAS2R20
Clinical trials, drugs, therapy
MyCancerGenomeTAS2R20
Protein Interactions : CTDTAS2R20
Pharm GKB GenePA134870599
PharosP59543
Clinical trialTAS2R20
Miscellaneous
canSAR (ICR)TAS2R20
HarmonizomeTAS2R20
DataMed IndexTAS2R20
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTAS2R20
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:24:52 CEST 2021

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