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TAS2R30 (taste 2 receptor member 30)

Identity

Alias_namesTAS2R47
taste receptor, type 2, member 47
taste receptor, type 2, member 30
Alias_symbol (synonym)T2R30
Other aliasT2R47
HGNC (Hugo) TAS2R30
LocusID (NCBI) 259293
Atlas_Id 74493
Location 12p13.2  [Link to chromosome band 12p13]
Location_base_pair Starts at 11133285 and ends at 11134244 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TAS2R30   19112
Cards
Entrez_Gene (NCBI)TAS2R30  259293  taste 2 receptor member 30
AliasesT2R30; T2R47; TAS2R47
GeneCards (Weizmann)TAS2R30
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr12:11133285-11134244 [Contig_View]  TAS2R30 [Vega]
TCGA cBioPortalTAS2R30
AceView (NCBI)TAS2R30
Genatlas (Paris)TAS2R30
WikiGenes259293
SOURCE (Princeton)TAS2R30
Genetics Home Reference (NIH)TAS2R30
Genomic and cartography
GoldenPath hg38 (UCSC)TAS2R30  -     chr12:11133285-11134244 -  12p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAS2R30  -     12p13.2   [Description]    (hg19-Feb_2009)
EnsemblTAS2R30 - 12p13.2 [CytoView hg19]  TAS2R30 - 12p13.2 [CytoView hg38]
Mapping of homologs : NCBITAS2R30 [Mapview hg19]  TAS2R30 [Mapview hg38]
OMIM613963   
Gene and transcription
Genbank (Entrez)BC156865
RefSeq transcript (Entrez)NM_001097643
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_187658 NW_003571050
Consensus coding sequences : CCDS (NCBI)TAS2R30
Cluster EST : UnigeneHs.679464 [ NCBI ]
CGAP (NCI)Hs.679464
Gene ExpressionTAS2R30 [ NCBI-GEO ]   TAS2R30 [ EBI - ARRAY_EXPRESS ]   TAS2R30 [ SEEK ]   TAS2R30 [ MEM ]
Gene Expression Viewer (FireBrowse)TAS2R30 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)259293
GTEX Portal (Tissue expression)TAS2R30
Protein : pattern, domain, 3D structure
UniProt/SwissProtP59541   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP59541  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP59541
Splice isoforms : SwissVarP59541
PhosPhoSitePlusP59541
Domains : Interpro (EBI)T2R   
Domain families : Pfam (Sanger)TAS2R (PF05296)   
Domain families : Pfam (NCBI)pfam05296   
Conserved Domain (NCBI)TAS2R30
DMDM Disease mutations259293
Blocks (Seattle)TAS2R30
SuperfamilyP59541
Peptide AtlasP59541
IPIIPI00255108   IPI00956350   IPI00956469   IPI00956201   
Protein Interaction databases
DIP (DOE-UCLA)P59541
IntAct (EBI)P59541
BioGRIDTAS2R30
STRING (EMBL)TAS2R30
ZODIACTAS2R30
Ontologies - Pathways
QuickGOP59541
Ontology : AmiGOdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  bitter taste receptor activity  
Ontology : EGO-EBIdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  bitter taste receptor activity  
Pathways : KEGGTaste transduction   
NDEx NetworkTAS2R30
Atlas of Cancer Signalling NetworkTAS2R30
Wikipedia pathwaysTAS2R30
Orthology - Evolution
OrthoDB259293
Phylogenetic Trees/Animal Genes : TreeFamTAS2R30
HOVERGENP59541
HOGENOMP59541
Homologs : HomoloGeneTAS2R30
Homology/Alignments : Family Browser (UCSC)TAS2R30
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAS2R30 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAS2R30
dbVarTAS2R30
ClinVarTAS2R30
1000_GenomesTAS2R30 
Exome Variant ServerTAS2R30
ExAC (Exome Aggregation Consortium)TAS2R30 (select the gene name)
Genetic variants : HAPMAP259293
Genomic Variants (DGV)TAS2R30 [DGVbeta]
DECIPHERTAS2R30 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAS2R30 
Mutations
ICGC Data PortalTAS2R30 
TCGA Data PortalTAS2R30 
Broad Tumor PortalTAS2R30
OASIS PortalTAS2R30 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAS2R30  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTAS2R30
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TAS2R30
DgiDB (Drug Gene Interaction Database)TAS2R30
DoCM (Curated mutations)TAS2R30 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TAS2R30 (select a term)
intoGenTAS2R30
Cancer3DTAS2R30(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613963   
Orphanet
MedgenTAS2R30
Genetic Testing Registry TAS2R30
NextProtP59541 [Medical]
TSGene259293
GENETestsTAS2R30
Target ValidationTAS2R30
Huge Navigator TAS2R30 [HugePedia]
snp3D : Map Gene to Disease259293
BioCentury BCIQTAS2R30
ClinGenTAS2R30
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD259293
Chemical/Pharm GKB GenePA134917827
Clinical trialTAS2R30
Miscellaneous
canSAR (ICR)TAS2R30 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTAS2R30
EVEXTAS2R30
GoPubMedTAS2R30
iHOPTAS2R30
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:44:53 CEST 2017

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