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TAS2R31 (taste 2 receptor member 31)

Identity

Alias_namesTAS2R44
taste receptor, type 2, member 44
taste receptor, type 2, member 31
Alias_symbol (synonym)T2R31
T2R53
Other aliasT2R44
HGNC (Hugo) TAS2R31
LocusID (NCBI) 259290
Atlas_Id 74494
Location 12p13.2  [Link to chromosome band 12p13]
Location_base_pair Starts at 11030387 and ends at 11031407 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TAS2R31   19113
Cards
Entrez_Gene (NCBI)TAS2R31  259290  taste 2 receptor member 31
AliasesT2R31; T2R44; T2R53; TAS2R44
GeneCards (Weizmann)TAS2R31
Ensembl hg19 (Hinxton)ENSG00000256436 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000256436 [Gene_View]  chr12:11030387-11031407 [Contig_View]  TAS2R31 [Vega]
ICGC DataPortalENSG00000256436
TCGA cBioPortalTAS2R31
AceView (NCBI)TAS2R31
Genatlas (Paris)TAS2R31
WikiGenes259290
SOURCE (Princeton)TAS2R31
Genetics Home Reference (NIH)TAS2R31
Genomic and cartography
GoldenPath hg38 (UCSC)TAS2R31  -     chr12:11030387-11031407 -  12p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAS2R31  -     12p13.2   [Description]    (hg19-Feb_2009)
EnsemblTAS2R31 - 12p13.2 [CytoView hg19]  TAS2R31 - 12p13.2 [CytoView hg38]
Mapping of homologs : NCBITAS2R31 [Mapview hg19]  TAS2R31 [Mapview hg38]
OMIM612669   
Gene and transcription
Genbank (Entrez)BC117421 HQ258369
RefSeq transcript (Entrez)NM_176885
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_187658 NW_003571050
Consensus coding sequences : CCDS (NCBI)TAS2R31
Cluster EST : UnigeneHs.688197 [ NCBI ]
CGAP (NCI)Hs.688197
Alternative Splicing GalleryENSG00000256436
Gene ExpressionTAS2R31 [ NCBI-GEO ]   TAS2R31 [ EBI - ARRAY_EXPRESS ]   TAS2R31 [ SEEK ]   TAS2R31 [ MEM ]
Gene Expression Viewer (FireBrowse)TAS2R31 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)259290
GTEX Portal (Tissue expression)TAS2R31
Human Protein AtlasENSG00000256436-TAS2R31 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP59538   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP59538  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP59538
Splice isoforms : SwissVarP59538
PhosPhoSitePlusP59538
Domains : Interpro (EBI)T2R   
Domain families : Pfam (Sanger)TAS2R (PF05296)   
Domain families : Pfam (NCBI)pfam05296   
Conserved Domain (NCBI)TAS2R31
DMDM Disease mutations259290
Blocks (Seattle)TAS2R31
SuperfamilyP59538
Human Protein Atlas [tissue]ENSG00000256436-TAS2R31 [tissue]
Peptide AtlasP59538
HPRD18153
IPIIPI00259671   
Protein Interaction databases
DIP (DOE-UCLA)P59538
IntAct (EBI)P59538
FunCoupENSG00000256436
BioGRIDTAS2R31
STRING (EMBL)TAS2R31
ZODIACTAS2R31
Ontologies - Pathways
QuickGOP59538
Ontology : AmiGOdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  bitter taste receptor activity  
Ontology : EGO-EBIdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  bitter taste receptor activity  
Pathways : KEGGTaste transduction   
NDEx NetworkTAS2R31
Atlas of Cancer Signalling NetworkTAS2R31
Wikipedia pathwaysTAS2R31
Orthology - Evolution
OrthoDB259290
GeneTree (enSembl)ENSG00000256436
Phylogenetic Trees/Animal Genes : TreeFamTAS2R31
HOVERGENP59538
HOGENOMP59538
Homologs : HomoloGeneTAS2R31
Homology/Alignments : Family Browser (UCSC)TAS2R31
Gene fusions - Rearrangements
Fusion: Tumor Portal TAS2R31
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAS2R31 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAS2R31
dbVarTAS2R31
ClinVarTAS2R31
1000_GenomesTAS2R31 
Exome Variant ServerTAS2R31
ExAC (Exome Aggregation Consortium)ENSG00000256436
GNOMAD BrowserENSG00000256436
Genetic variants : HAPMAP259290
Genomic Variants (DGV)TAS2R31 [DGVbeta]
DECIPHERTAS2R31 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAS2R31 
Mutations
ICGC Data PortalTAS2R31 
TCGA Data PortalTAS2R31 
Broad Tumor PortalTAS2R31
OASIS PortalTAS2R31 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAS2R31  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTAS2R31
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TAS2R31
DgiDB (Drug Gene Interaction Database)TAS2R31
DoCM (Curated mutations)TAS2R31 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TAS2R31 (select a term)
intoGenTAS2R31
Cancer3DTAS2R31(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612669   
Orphanet
MedgenTAS2R31
Genetic Testing Registry TAS2R31
NextProtP59538 [Medical]
TSGene259290
GENETestsTAS2R31
Target ValidationTAS2R31
Huge Navigator TAS2R31 [HugePedia]
snp3D : Map Gene to Disease259290
BioCentury BCIQTAS2R31
ClinGenTAS2R31
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD259290
Chemical/Pharm GKB GenePA134893789
Clinical trialTAS2R31
Miscellaneous
canSAR (ICR)TAS2R31 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTAS2R31
EVEXTAS2R31
GoPubMedTAS2R31
iHOPTAS2R31
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:31:44 CET 2017

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