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TAS2R4 (taste 2 receptor member 4)

Identity

Alias_namestaste receptor, type 2, member 4
Alias_symbol (synonym)T2R4
Other alias
HGNC (Hugo) TAS2R4
LocusID (NCBI) 50832
Atlas_Id 74496
Location 7q34  [Link to chromosome band 7q34]
Location_base_pair Starts at 141778489 and ends at 141779388 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TAS2R4   14911
Cards
Entrez_Gene (NCBI)TAS2R4  50832  taste 2 receptor member 4
AliasesT2R4
GeneCards (Weizmann)TAS2R4
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:141778489-141779388 [Contig_View]  TAS2R4 [Vega]
TCGA cBioPortalTAS2R4
AceView (NCBI)TAS2R4
Genatlas (Paris)TAS2R4
WikiGenes50832
SOURCE (Princeton)TAS2R4
Genetics Home Reference (NIH)TAS2R4
Genomic and cartography
GoldenPath hg38 (UCSC)TAS2R4  -     chr7:141778489-141779388 +  7q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAS2R4  -     7q34   [Description]    (hg19-Feb_2009)
EnsemblTAS2R4 - 7q34 [CytoView hg19]  TAS2R4 - 7q34 [CytoView hg38]
Mapping of homologs : NCBITAS2R4 [Mapview hg19]  TAS2R4 [Mapview hg38]
OMIM604869   
Gene and transcription
Genbank (Entrez)BC130439 BC136508 HQ258372
RefSeq transcript (Entrez)NM_016944
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TAS2R4
Cluster EST : UnigeneHs.735690 [ NCBI ]
CGAP (NCI)Hs.735690
Gene ExpressionTAS2R4 [ NCBI-GEO ]   TAS2R4 [ EBI - ARRAY_EXPRESS ]   TAS2R4 [ SEEK ]   TAS2R4 [ MEM ]
Gene Expression Viewer (FireBrowse)TAS2R4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)50832
GTEX Portal (Tissue expression)TAS2R4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NYW5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NYW5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NYW5
Splice isoforms : SwissVarQ9NYW5
PhosPhoSitePlusQ9NYW5
Domains : Interpro (EBI)T2R    TAS2R4   
Domain families : Pfam (Sanger)TAS2R (PF05296)   
Domain families : Pfam (NCBI)pfam05296   
Conserved Domain (NCBI)TAS2R4
DMDM Disease mutations50832
Blocks (Seattle)TAS2R4
SuperfamilyQ9NYW5
Peptide AtlasQ9NYW5
HPRD05336
IPIIPI00027213   
Protein Interaction databases
DIP (DOE-UCLA)Q9NYW5
IntAct (EBI)Q9NYW5
BioGRIDTAS2R4
STRING (EMBL)TAS2R4
ZODIACTAS2R4
Ontologies - Pathways
QuickGOQ9NYW5
Ontology : AmiGOdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  respiratory gaseous exchange  taste receptor activity  integral component of membrane  bitter taste receptor activity  sensory perception of taste  ciliary membrane  
Ontology : EGO-EBIdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  respiratory gaseous exchange  taste receptor activity  integral component of membrane  bitter taste receptor activity  sensory perception of taste  ciliary membrane  
Pathways : KEGGTaste transduction   
NDEx NetworkTAS2R4
Atlas of Cancer Signalling NetworkTAS2R4
Wikipedia pathwaysTAS2R4
Orthology - Evolution
OrthoDB50832
Phylogenetic Trees/Animal Genes : TreeFamTAS2R4
HOVERGENQ9NYW5
HOGENOMQ9NYW5
Homologs : HomoloGeneTAS2R4
Homology/Alignments : Family Browser (UCSC)TAS2R4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAS2R4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAS2R4
dbVarTAS2R4
ClinVarTAS2R4
1000_GenomesTAS2R4 
Exome Variant ServerTAS2R4
ExAC (Exome Aggregation Consortium)TAS2R4 (select the gene name)
Genetic variants : HAPMAP50832
Genomic Variants (DGV)TAS2R4 [DGVbeta]
DECIPHERTAS2R4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAS2R4 
Mutations
ICGC Data PortalTAS2R4 
TCGA Data PortalTAS2R4 
Broad Tumor PortalTAS2R4
OASIS PortalTAS2R4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAS2R4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTAS2R4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TAS2R4
DgiDB (Drug Gene Interaction Database)TAS2R4
DoCM (Curated mutations)TAS2R4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TAS2R4 (select a term)
intoGenTAS2R4
Cancer3DTAS2R4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604869   
Orphanet
MedgenTAS2R4
Genetic Testing Registry TAS2R4
NextProtQ9NYW5 [Medical]
TSGene50832
GENETestsTAS2R4
Target ValidationTAS2R4
Huge Navigator TAS2R4 [HugePedia]
snp3D : Map Gene to Disease50832
BioCentury BCIQTAS2R4
ClinGenTAS2R4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD50832
Chemical/Pharm GKB GenePA37923
Clinical trialTAS2R4
Miscellaneous
canSAR (ICR)TAS2R4 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTAS2R4
EVEXTAS2R4
GoPubMedTAS2R4
iHOPTAS2R4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:44:53 CEST 2017

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