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TAS2R41 (taste receptor, type 2, member 41)

Identity

Alias_namestaste receptor, type 2, member 41
Alias_symbol (synonym)T2R59
Other aliasT2R41
HGNC (Hugo) TAS2R41
LocusID (NCBI) 259287
Atlas_Id 74498
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 143174966 and ends at 143175889 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TAS2R41   18883
Cards
Entrez_Gene (NCBI)TAS2R41  259287  taste receptor, type 2, member 41
AliasesT2R41; T2R59
GeneCards (Weizmann)TAS2R41
Ensembl hg19 (Hinxton)ENSG00000221855 [Gene_View]  chr7:143174966-143175889 [Contig_View]  TAS2R41 [Vega]
Ensembl hg38 (Hinxton)ENSG00000221855 [Gene_View]  chr7:143174966-143175889 [Contig_View]  TAS2R41 [Vega]
ICGC DataPortalENSG00000221855
TCGA cBioPortalTAS2R41
AceView (NCBI)TAS2R41
Genatlas (Paris)TAS2R41
WikiGenes259287
SOURCE (Princeton)TAS2R41
Genetics Home Reference (NIH)TAS2R41
Genomic and cartography
GoldenPath hg19 (UCSC)TAS2R41  -     chr7:143174966-143175889 +  7q35   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TAS2R41  -     7q35   [Description]    (hg38-Dec_2013)
EnsemblTAS2R41 - 7q35 [CytoView hg19]  TAS2R41 - 7q35 [CytoView hg38]
Mapping of homologs : NCBITAS2R41 [Mapview hg19]  TAS2R41 [Mapview hg38]
OMIM613965   
Gene and transcription
Genbank (Entrez)BC101157 BC101158
RefSeq transcript (Entrez)NM_176883
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929333
Consensus coding sequences : CCDS (NCBI)TAS2R41
Cluster EST : UnigeneHs.650648 [ NCBI ]
CGAP (NCI)Hs.650648
Alternative Splicing GalleryENSG00000221855
Gene ExpressionTAS2R41 [ NCBI-GEO ]   TAS2R41 [ EBI - ARRAY_EXPRESS ]   TAS2R41 [ SEEK ]   TAS2R41 [ MEM ]
Gene Expression Viewer (FireBrowse)TAS2R41 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)259287
GTEX Portal (Tissue expression)TAS2R41
Protein : pattern, domain, 3D structure
UniProt/SwissProtP59536   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP59536  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP59536
Splice isoforms : SwissVarP59536
PhosPhoSitePlusP59536
Domains : Interpro (EBI)T2R   
Domain families : Pfam (Sanger)TAS2R (PF05296)   
Domain families : Pfam (NCBI)pfam05296   
Conserved Domain (NCBI)TAS2R41
DMDM Disease mutations259287
Blocks (Seattle)TAS2R41
SuperfamilyP59536
Human Protein AtlasENSG00000221855
Peptide AtlasP59536
HPRD18151
IPIIPI00221132   
Protein Interaction databases
DIP (DOE-UCLA)P59536
IntAct (EBI)P59536
FunCoupENSG00000221855
BioGRIDTAS2R41
STRING (EMBL)TAS2R41
ZODIACTAS2R41
Ontologies - Pathways
QuickGOP59536
Ontology : AmiGOdetection of chemical stimulus involved in sensory perception of bitter taste  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  bitter taste receptor activity  
Ontology : EGO-EBIdetection of chemical stimulus involved in sensory perception of bitter taste  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  bitter taste receptor activity  
Pathways : KEGGTaste transduction   
NDEx NetworkTAS2R41
Atlas of Cancer Signalling NetworkTAS2R41
Wikipedia pathwaysTAS2R41
Orthology - Evolution
OrthoDB259287
GeneTree (enSembl)ENSG00000221855
Phylogenetic Trees/Animal Genes : TreeFamTAS2R41
HOVERGENP59536
HOGENOMP59536
Homologs : HomoloGeneTAS2R41
Homology/Alignments : Family Browser (UCSC)TAS2R41
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAS2R41 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAS2R41
dbVarTAS2R41
ClinVarTAS2R41
1000_GenomesTAS2R41 
Exome Variant ServerTAS2R41
ExAC (Exome Aggregation Consortium)TAS2R41 (select the gene name)
Genetic variants : HAPMAP259287
Genomic Variants (DGV)TAS2R41 [DGVbeta]
DECIPHER (Syndromes)7:143174966-143175889  ENSG00000221855
CONAN: Copy Number AnalysisTAS2R41 
Mutations
ICGC Data PortalTAS2R41 
TCGA Data PortalTAS2R41 
Broad Tumor PortalTAS2R41
OASIS PortalTAS2R41 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAS2R41  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTAS2R41
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TAS2R41
DgiDB (Drug Gene Interaction Database)TAS2R41
DoCM (Curated mutations)TAS2R41 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TAS2R41 (select a term)
intoGenTAS2R41
Cancer3DTAS2R41(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613965   
Orphanet
MedgenTAS2R41
Genetic Testing Registry TAS2R41
NextProtP59536 [Medical]
TSGene259287
GENETestsTAS2R41
Huge Navigator TAS2R41 [HugePedia]
snp3D : Map Gene to Disease259287
BioCentury BCIQTAS2R41
ClinGenTAS2R41
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD259287
Chemical/Pharm GKB GenePA38737
Clinical trialTAS2R41
Miscellaneous
canSAR (ICR)TAS2R41 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTAS2R41
EVEXTAS2R41
GoPubMedTAS2R41
iHOPTAS2R41
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:47:27 CET 2017

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