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TAS2R43 (taste 2 receptor member 43)

Identity

Alias (NCBI)T2R43
T2R52
HGNC (Hugo) TAS2R43
HGNC Alias symbT2R52
HGNC Previous nametaste receptor, type 2, member 43
LocusID (NCBI) 259289
Atlas_Id 74500
Location 12p13.2  [Link to chromosome band 12p13]
Location_base_pair Starts at 11091287 and ends at 11092313 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TAS2R43   18875
Cards
Entrez_Gene (NCBI)TAS2R43    taste 2 receptor member 43
AliasesT2R43; T2R52
GeneCards (Weizmann)TAS2R43
Ensembl hg19 (Hinxton)ENSG00000255374 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255374 [Gene_View]  ENSG00000255374 [Sequence]  chr12:11091287-11092313 [Contig_View]  TAS2R43 [Vega]
ICGC DataPortalENSG00000255374
TCGA cBioPortalTAS2R43
AceView (NCBI)TAS2R43
Genatlas (Paris)TAS2R43
SOURCE (Princeton)TAS2R43
Genetics Home Reference (NIH)TAS2R43
Genomic and cartography
GoldenPath hg38 (UCSC)TAS2R43  -     chr12:11091287-11092313 -  12p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAS2R43  -     12p13.2   [Description]    (hg19-Feb_2009)
GoldenPathTAS2R43 - 12p13.2 [CytoView hg19]  TAS2R43 - 12p13.2 [CytoView hg38]
ImmunoBaseENSG00000255374
Genome Data Viewer NCBITAS2R43 [Mapview hg19]  
OMIM612668   
Gene and transcription
Genbank (Entrez)BC101155 BC117423
RefSeq transcript (Entrez)NM_176884
Consensus coding sequences : CCDS (NCBI)TAS2R43
Gene ExpressionTAS2R43 [ NCBI-GEO ]   TAS2R43 [ EBI - ARRAY_EXPRESS ]   TAS2R43 [ SEEK ]   TAS2R43 [ MEM ]
Gene Expression Viewer (FireBrowse)TAS2R43 [ Firebrowse - Broad ]
GenevisibleExpression of TAS2R43 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)259289
GTEX Portal (Tissue expression)TAS2R43
Human Protein AtlasENSG00000255374-TAS2R43 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP59537   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP59537  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP59537
PhosPhoSitePlusP59537
Domains : Interpro (EBI)TAS2R   
Domain families : Pfam (Sanger)TAS2R (PF05296)   
Domain families : Pfam (NCBI)pfam05296   
Conserved Domain (NCBI)TAS2R43
SuperfamilyP59537
AlphaFold pdb e-kbP59537   
Human Protein Atlas [tissue]ENSG00000255374-TAS2R43 [tissue]
HPRD18152
Protein Interaction databases
DIP (DOE-UCLA)P59537
IntAct (EBI)P59537
BioGRIDTAS2R43
STRING (EMBL)TAS2R43
ZODIACTAS2R43
Ontologies - Pathways
QuickGOP59537
Ontology : AmiGOdetection of chemical stimulus involved in sensory perception of bitter taste  detection of chemical stimulus involved in sensory perception of bitter taste  G protein-coupled receptor activity  plasma membrane  G protein-coupled receptor signaling pathway  G protein-coupled receptor signaling pathway  taste receptor activity  integral component of membrane  integral component of membrane  motile cilium  bitter taste receptor activity  bitter taste receptor activity  ciliary membrane  
Ontology : EGO-EBIdetection of chemical stimulus involved in sensory perception of bitter taste  detection of chemical stimulus involved in sensory perception of bitter taste  G protein-coupled receptor activity  plasma membrane  G protein-coupled receptor signaling pathway  G protein-coupled receptor signaling pathway  taste receptor activity  integral component of membrane  integral component of membrane  motile cilium  bitter taste receptor activity  bitter taste receptor activity  ciliary membrane  
Pathways : KEGGTaste transduction   
NDEx NetworkTAS2R43
Atlas of Cancer Signalling NetworkTAS2R43
Wikipedia pathwaysTAS2R43
Orthology - Evolution
OrthoDB259289
GeneTree (enSembl)ENSG00000255374
Phylogenetic Trees/Animal Genes : TreeFamTAS2R43
Homologs : HomoloGeneTAS2R43
Homology/Alignments : Family Browser (UCSC)TAS2R43
Gene fusions - Rearrangements
Fusion : QuiverTAS2R43
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAS2R43 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAS2R43
dbVarTAS2R43
ClinVarTAS2R43
MonarchTAS2R43
1000_GenomesTAS2R43 
Exome Variant ServerTAS2R43
GNOMAD BrowserENSG00000255374
Varsome BrowserTAS2R43
ACMGTAS2R43 variants
VarityP59537
Genomic Variants (DGV)TAS2R43 [DGVbeta]
DECIPHERTAS2R43 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAS2R43 
Mutations
ICGC Data PortalTAS2R43 
TCGA Data PortalTAS2R43 
Broad Tumor PortalTAS2R43
OASIS PortalTAS2R43 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAS2R43  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTAS2R43
Mutations and Diseases : HGMDTAS2R43
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTAS2R43
DgiDB (Drug Gene Interaction Database)TAS2R43
DoCM (Curated mutations)TAS2R43
CIViC (Clinical Interpretations of Variants in Cancer)TAS2R43
Cancer3DTAS2R43
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612668   
Orphanet
DisGeNETTAS2R43
MedgenTAS2R43
Genetic Testing Registry TAS2R43
NextProtP59537 [Medical]
GENETestsTAS2R43
Target ValidationTAS2R43
Huge Navigator TAS2R43 [HugePedia]
ClinGenTAS2R43
Clinical trials, drugs, therapy
MyCancerGenomeTAS2R43
Protein Interactions : CTDTAS2R43
Pharm GKB GenePA38729
PharosP59537
Clinical trialTAS2R43
Miscellaneous
canSAR (ICR)TAS2R43
HarmonizomeTAS2R43
DataMed IndexTAS2R43
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTAS2R43
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:24:53 CEST 2021

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