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TAS2R46 (taste 2 receptor member 46)

Identity

Alias_namestaste receptor, type 2, member 46
Alias_symbol (synonym)T2R54
Other aliasT2R46
HGNC (Hugo) TAS2R46
LocusID (NCBI) 259292
Atlas_Id 74501
Location 12p13.2  [Link to chromosome band 12p13]
Location_base_pair Starts at 11061365 and ends at 11062294 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TAS2R46   18877
Cards
Entrez_Gene (NCBI)TAS2R46  259292  taste 2 receptor member 46
AliasesT2R46; T2R54
GeneCards (Weizmann)TAS2R46
Ensembl hg19 (Hinxton)ENSG00000226761 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226761 [Gene_View]  chr12:11061365-11062294 [Contig_View]  TAS2R46 [Vega]
ICGC DataPortalENSG00000226761
TCGA cBioPortalTAS2R46
AceView (NCBI)TAS2R46
Genatlas (Paris)TAS2R46
WikiGenes259292
SOURCE (Princeton)TAS2R46
Genetics Home Reference (NIH)TAS2R46
Genomic and cartography
GoldenPath hg38 (UCSC)TAS2R46  -     chr12:11061365-11062294 -  12p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAS2R46  -     12p13.2   [Description]    (hg19-Feb_2009)
EnsemblTAS2R46 - 12p13.2 [CytoView hg19]  TAS2R46 - 12p13.2 [CytoView hg38]
Mapping of homologs : NCBITAS2R46 [Mapview hg19]  TAS2R46 [Mapview hg38]
OMIM612774   
Gene and transcription
Genbank (Entrez)BC115401
RefSeq transcript (Entrez)NM_176887
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_187658 NW_003571050
Consensus coding sequences : CCDS (NCBI)TAS2R46
Cluster EST : UnigeneHs.688193 [ NCBI ]
CGAP (NCI)Hs.688193
Alternative Splicing GalleryENSG00000226761
Gene ExpressionTAS2R46 [ NCBI-GEO ]   TAS2R46 [ EBI - ARRAY_EXPRESS ]   TAS2R46 [ SEEK ]   TAS2R46 [ MEM ]
Gene Expression Viewer (FireBrowse)TAS2R46 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)259292
GTEX Portal (Tissue expression)TAS2R46
Protein : pattern, domain, 3D structure
UniProt/SwissProtP59540   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP59540  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP59540
Splice isoforms : SwissVarP59540
PhosPhoSitePlusP59540
Domains : Interpro (EBI)T2R   
Domain families : Pfam (Sanger)TAS2R (PF05296)   
Domain families : Pfam (NCBI)pfam05296   
Conserved Domain (NCBI)TAS2R46
DMDM Disease mutations259292
Blocks (Seattle)TAS2R46
SuperfamilyP59540
Human Protein AtlasENSG00000226761
Peptide AtlasP59540
HPRD18155
IPIIPI00470541   
Protein Interaction databases
DIP (DOE-UCLA)P59540
IntAct (EBI)P59540
FunCoupENSG00000226761
BioGRIDTAS2R46
STRING (EMBL)TAS2R46
ZODIACTAS2R46
Ontologies - Pathways
QuickGOP59540
Ontology : AmiGOdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  bitter taste receptor activity  ciliary membrane  
Ontology : EGO-EBIdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  bitter taste receptor activity  ciliary membrane  
Pathways : KEGGTaste transduction   
NDEx NetworkTAS2R46
Atlas of Cancer Signalling NetworkTAS2R46
Wikipedia pathwaysTAS2R46
Orthology - Evolution
OrthoDB259292
GeneTree (enSembl)ENSG00000226761
Phylogenetic Trees/Animal Genes : TreeFamTAS2R46
HOVERGENP59540
HOGENOMP59540
Homologs : HomoloGeneTAS2R46
Homology/Alignments : Family Browser (UCSC)TAS2R46
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAS2R46 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAS2R46
dbVarTAS2R46
ClinVarTAS2R46
1000_GenomesTAS2R46 
Exome Variant ServerTAS2R46
ExAC (Exome Aggregation Consortium)TAS2R46 (select the gene name)
Genetic variants : HAPMAP259292
Genomic Variants (DGV)TAS2R46 [DGVbeta]
DECIPHERTAS2R46 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAS2R46 
Mutations
ICGC Data PortalTAS2R46 
TCGA Data PortalTAS2R46 
Broad Tumor PortalTAS2R46
OASIS PortalTAS2R46 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAS2R46  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTAS2R46
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TAS2R46
DgiDB (Drug Gene Interaction Database)TAS2R46
DoCM (Curated mutations)TAS2R46 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TAS2R46 (select a term)
intoGenTAS2R46
Cancer3DTAS2R46(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612774   
Orphanet
MedgenTAS2R46
Genetic Testing Registry TAS2R46
NextProtP59540 [Medical]
TSGene259292
GENETestsTAS2R46
Target ValidationTAS2R46
Huge Navigator TAS2R46 [HugePedia]
snp3D : Map Gene to Disease259292
BioCentury BCIQTAS2R46
ClinGenTAS2R46
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD259292
Chemical/Pharm GKB GenePA38731
Clinical trialTAS2R46
Miscellaneous
canSAR (ICR)TAS2R46 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTAS2R46
EVEXTAS2R46
GoPubMedTAS2R46
iHOPTAS2R46
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:44:54 CEST 2017

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