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TAS2R5 (taste 2 receptor member 5)

Identity

Alias_namestaste receptor, type 2, member 5
Alias_symbol (synonym)T2R5
Other alias
HGNC (Hugo) TAS2R5
LocusID (NCBI) 54429
Atlas_Id 74502
Location 7q34  [Link to chromosome band 7q34]
Location_base_pair Starts at 141790217 and ends at 141791366 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TAS2R5   14912
Cards
Entrez_Gene (NCBI)TAS2R5  54429  taste 2 receptor member 5
AliasesT2R5
GeneCards (Weizmann)TAS2R5
Ensembl hg19 (Hinxton)ENSG00000127366 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000127366 [Gene_View]  chr7:141790217-141791366 [Contig_View]  TAS2R5 [Vega]
ICGC DataPortalENSG00000127366
TCGA cBioPortalTAS2R5
AceView (NCBI)TAS2R5
Genatlas (Paris)TAS2R5
WikiGenes54429
SOURCE (Princeton)TAS2R5
Genetics Home Reference (NIH)TAS2R5
Genomic and cartography
GoldenPath hg38 (UCSC)TAS2R5  -     chr7:141790217-141791366 +  7q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAS2R5  -     7q34   [Description]    (hg19-Feb_2009)
EnsemblTAS2R5 - 7q34 [CytoView hg19]  TAS2R5 - 7q34 [CytoView hg38]
Mapping of homologs : NCBITAS2R5 [Mapview hg19]  TAS2R5 [Mapview hg38]
OMIM605062   
Gene and transcription
Genbank (Entrez)AW881072 BC069509 BC095522 BC101586 BC101588
RefSeq transcript (Entrez)NM_018980
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TAS2R5
Cluster EST : UnigeneHs.675370 [ NCBI ]
CGAP (NCI)Hs.675370
Alternative Splicing GalleryENSG00000127366
Gene ExpressionTAS2R5 [ NCBI-GEO ]   TAS2R5 [ EBI - ARRAY_EXPRESS ]   TAS2R5 [ SEEK ]   TAS2R5 [ MEM ]
Gene Expression Viewer (FireBrowse)TAS2R5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54429
GTEX Portal (Tissue expression)TAS2R5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NYW4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NYW4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NYW4
Splice isoforms : SwissVarQ9NYW4
PhosPhoSitePlusQ9NYW4
Domains : Interpro (EBI)T2R   
Domain families : Pfam (Sanger)TAS2R (PF05296)   
Domain families : Pfam (NCBI)pfam05296   
Conserved Domain (NCBI)TAS2R5
DMDM Disease mutations54429
Blocks (Seattle)TAS2R5
SuperfamilyQ9NYW4
Human Protein AtlasENSG00000127366
Peptide AtlasQ9NYW4
HPRD05453
IPIIPI00004476   
Protein Interaction databases
DIP (DOE-UCLA)Q9NYW4
IntAct (EBI)Q9NYW4
FunCoupENSG00000127366
BioGRIDTAS2R5
STRING (EMBL)TAS2R5
ZODIACTAS2R5
Ontologies - Pathways
QuickGOQ9NYW4
Ontology : AmiGOdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  chemosensory behavior  taste receptor activity  integral component of membrane  bitter taste receptor activity  sensory perception of taste  
Ontology : EGO-EBIdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  chemosensory behavior  taste receptor activity  integral component of membrane  bitter taste receptor activity  sensory perception of taste  
Pathways : KEGGTaste transduction   
NDEx NetworkTAS2R5
Atlas of Cancer Signalling NetworkTAS2R5
Wikipedia pathwaysTAS2R5
Orthology - Evolution
OrthoDB54429
GeneTree (enSembl)ENSG00000127366
Phylogenetic Trees/Animal Genes : TreeFamTAS2R5
HOVERGENQ9NYW4
HOGENOMQ9NYW4
Homologs : HomoloGeneTAS2R5
Homology/Alignments : Family Browser (UCSC)TAS2R5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAS2R5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAS2R5
dbVarTAS2R5
ClinVarTAS2R5
1000_GenomesTAS2R5 
Exome Variant ServerTAS2R5
ExAC (Exome Aggregation Consortium)TAS2R5 (select the gene name)
Genetic variants : HAPMAP54429
Genomic Variants (DGV)TAS2R5 [DGVbeta]
DECIPHERTAS2R5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAS2R5 
Mutations
ICGC Data PortalTAS2R5 
TCGA Data PortalTAS2R5 
Broad Tumor PortalTAS2R5
OASIS PortalTAS2R5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAS2R5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTAS2R5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TAS2R5
DgiDB (Drug Gene Interaction Database)TAS2R5
DoCM (Curated mutations)TAS2R5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TAS2R5 (select a term)
intoGenTAS2R5
Cancer3DTAS2R5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605062   
Orphanet
MedgenTAS2R5
Genetic Testing Registry TAS2R5
NextProtQ9NYW4 [Medical]
TSGene54429
GENETestsTAS2R5
Target ValidationTAS2R5
Huge Navigator TAS2R5 [HugePedia]
snp3D : Map Gene to Disease54429
BioCentury BCIQTAS2R5
ClinGenTAS2R5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54429
Chemical/Pharm GKB GenePA37924
Clinical trialTAS2R5
Miscellaneous
canSAR (ICR)TAS2R5 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTAS2R5
EVEXTAS2R5
GoPubMedTAS2R5
iHOPTAS2R5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:44:54 CEST 2017

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