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TAS2R60 (taste receptor, type 2, member 60)

Identity

Alias_namestaste receptor, type 2, member 60
Alias_symbol (synonym)T2R60
Other aliasT2R56
HGNC (Hugo) TAS2R60
LocusID (NCBI) 338398
Atlas_Id 74504
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 143140546 and ends at 143141502 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TAS2R60   20639
Cards
Entrez_Gene (NCBI)TAS2R60  338398  taste receptor, type 2, member 60
AliasesT2R56; T2R60
GeneCards (Weizmann)TAS2R60
Ensembl hg19 (Hinxton)ENSG00000185899 [Gene_View]  chr7:143140546-143141502 [Contig_View]  TAS2R60 [Vega]
Ensembl hg38 (Hinxton)ENSG00000185899 [Gene_View]  chr7:143140546-143141502 [Contig_View]  TAS2R60 [Vega]
ICGC DataPortalENSG00000185899
TCGA cBioPortalTAS2R60
AceView (NCBI)TAS2R60
Genatlas (Paris)TAS2R60
WikiGenes338398
SOURCE (Princeton)TAS2R60
Genetics Home Reference (NIH)TAS2R60
Genomic and cartography
GoldenPath hg19 (UCSC)TAS2R60  -     chr7:143140546-143141502 +  7q35   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TAS2R60  -     7q35   [Description]    (hg38-Dec_2013)
EnsemblTAS2R60 - 7q35 [CytoView hg19]  TAS2R60 - 7q35 [CytoView hg38]
Mapping of homologs : NCBITAS2R60 [Mapview hg19]  TAS2R60 [Mapview hg38]
OMIM613968   
Gene and transcription
Genbank (Entrez)BC100938 BC100939 BC100940 BC100941
RefSeq transcript (Entrez)NM_177437
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929333
Consensus coding sequences : CCDS (NCBI)TAS2R60
Cluster EST : UnigeneHs.688222 [ NCBI ]
CGAP (NCI)Hs.688222
Alternative Splicing GalleryENSG00000185899
Gene ExpressionTAS2R60 [ NCBI-GEO ]   TAS2R60 [ EBI - ARRAY_EXPRESS ]   TAS2R60 [ SEEK ]   TAS2R60 [ MEM ]
Gene Expression Viewer (FireBrowse)TAS2R60 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)338398
GTEX Portal (Tissue expression)TAS2R60
Protein : pattern, domain, 3D structure
UniProt/SwissProtP59551   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP59551  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP59551
Splice isoforms : SwissVarP59551
PhosPhoSitePlusP59551
Domains : Interpro (EBI)T2R   
Domain families : Pfam (Sanger)TAS2R (PF05296)   
Domain families : Pfam (NCBI)pfam05296   
Conserved Domain (NCBI)TAS2R60
DMDM Disease mutations338398
Blocks (Seattle)TAS2R60
SuperfamilyP59551
Human Protein AtlasENSG00000185899
Peptide AtlasP59551
HPRD18159
IPIIPI00250364   
Protein Interaction databases
DIP (DOE-UCLA)P59551
IntAct (EBI)P59551
FunCoupENSG00000185899
BioGRIDTAS2R60
STRING (EMBL)TAS2R60
ZODIACTAS2R60
Ontologies - Pathways
QuickGOP59551
Ontology : AmiGOdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  bitter taste receptor activity  sensory perception of bitter taste  
Ontology : EGO-EBIdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  bitter taste receptor activity  sensory perception of bitter taste  
Pathways : KEGGTaste transduction   
NDEx NetworkTAS2R60
Atlas of Cancer Signalling NetworkTAS2R60
Wikipedia pathwaysTAS2R60
Orthology - Evolution
OrthoDB338398
GeneTree (enSembl)ENSG00000185899
Phylogenetic Trees/Animal Genes : TreeFamTAS2R60
HOVERGENP59551
HOGENOMP59551
Homologs : HomoloGeneTAS2R60
Homology/Alignments : Family Browser (UCSC)TAS2R60
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAS2R60 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAS2R60
dbVarTAS2R60
ClinVarTAS2R60
1000_GenomesTAS2R60 
Exome Variant ServerTAS2R60
ExAC (Exome Aggregation Consortium)TAS2R60 (select the gene name)
Genetic variants : HAPMAP338398
Genomic Variants (DGV)TAS2R60 [DGVbeta]
DECIPHER (Syndromes)7:143140546-143141502  ENSG00000185899
CONAN: Copy Number AnalysisTAS2R60 
Mutations
ICGC Data PortalTAS2R60 
TCGA Data PortalTAS2R60 
Broad Tumor PortalTAS2R60
OASIS PortalTAS2R60 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAS2R60  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTAS2R60
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TAS2R60
DgiDB (Drug Gene Interaction Database)TAS2R60
DoCM (Curated mutations)TAS2R60 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TAS2R60 (select a term)
intoGenTAS2R60
Cancer3DTAS2R60(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613968   
Orphanet
MedgenTAS2R60
Genetic Testing Registry TAS2R60
NextProtP59551 [Medical]
TSGene338398
GENETestsTAS2R60
Huge Navigator TAS2R60 [HugePedia]
snp3D : Map Gene to Disease338398
BioCentury BCIQTAS2R60
ClinGenTAS2R60
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338398
Chemical/Pharm GKB GenePA134879120
Clinical trialTAS2R60
Miscellaneous
canSAR (ICR)TAS2R60 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTAS2R60
EVEXTAS2R60
GoPubMedTAS2R60
iHOPTAS2R60
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:47:29 CET 2017

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