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TAS2R7 (taste 2 receptor member 7)

Identity

Alias_namestaste receptor, type 2, member 7
Alias_symbol (synonym)T2R7
TRB4
Other alias
HGNC (Hugo) TAS2R7
LocusID (NCBI) 50837
Atlas_Id 74505
Location 12p13.2  [Link to chromosome band 12p13]
Location_base_pair Starts at 10801532 and ends at 10802627 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TAS2R7   14913
Cards
Entrez_Gene (NCBI)TAS2R7  50837  taste 2 receptor member 7
AliasesT2R7; TRB4
GeneCards (Weizmann)TAS2R7
Ensembl hg19 (Hinxton)ENSG00000121377 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000121377 [Gene_View]  chr12:10801532-10802627 [Contig_View]  TAS2R7 [Vega]
ICGC DataPortalENSG00000121377
TCGA cBioPortalTAS2R7
AceView (NCBI)TAS2R7
Genatlas (Paris)TAS2R7
WikiGenes50837
SOURCE (Princeton)TAS2R7
Genetics Home Reference (NIH)TAS2R7
Genomic and cartography
GoldenPath hg38 (UCSC)TAS2R7  -     chr12:10801532-10802627 -  12p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TAS2R7  -     12p13.2   [Description]    (hg19-Feb_2009)
EnsemblTAS2R7 - 12p13.2 [CytoView hg19]  TAS2R7 - 12p13.2 [CytoView hg38]
Mapping of homologs : NCBITAS2R7 [Mapview hg19]  TAS2R7 [Mapview hg38]
OMIM604793   
Gene and transcription
Genbank (Entrez)BC069091 BC093992 BC113561
RefSeq transcript (Entrez)NM_023919
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_187658 NW_003571050
Consensus coding sequences : CCDS (NCBI)TAS2R7
Cluster EST : UnigeneHs.533754 [ NCBI ]
CGAP (NCI)Hs.533754
Alternative Splicing GalleryENSG00000121377
Gene ExpressionTAS2R7 [ NCBI-GEO ]   TAS2R7 [ EBI - ARRAY_EXPRESS ]   TAS2R7 [ SEEK ]   TAS2R7 [ MEM ]
Gene Expression Viewer (FireBrowse)TAS2R7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)50837
GTEX Portal (Tissue expression)TAS2R7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NYW3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NYW3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NYW3
Splice isoforms : SwissVarQ9NYW3
PhosPhoSitePlusQ9NYW3
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn_7TM    T2R    TAS2R7   
Domain families : Pfam (Sanger)TAS2R (PF05296)   
Domain families : Pfam (NCBI)pfam05296   
Conserved Domain (NCBI)TAS2R7
DMDM Disease mutations50837
Blocks (Seattle)TAS2R7
SuperfamilyQ9NYW3
Human Protein AtlasENSG00000121377
Peptide AtlasQ9NYW3
HPRD16071
IPIIPI00028328   
Protein Interaction databases
DIP (DOE-UCLA)Q9NYW3
IntAct (EBI)Q9NYW3
FunCoupENSG00000121377
BioGRIDTAS2R7
STRING (EMBL)TAS2R7
ZODIACTAS2R7
Ontologies - Pathways
QuickGOQ9NYW3
Ontology : AmiGOdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  taste receptor activity  integral component of membrane  bitter taste receptor activity  
Ontology : EGO-EBIdetection of chemical stimulus involved in sensory perception of bitter taste  G-protein coupled receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  taste receptor activity  integral component of membrane  bitter taste receptor activity  
Pathways : KEGGTaste transduction   
NDEx NetworkTAS2R7
Atlas of Cancer Signalling NetworkTAS2R7
Wikipedia pathwaysTAS2R7
Orthology - Evolution
OrthoDB50837
GeneTree (enSembl)ENSG00000121377
Phylogenetic Trees/Animal Genes : TreeFamTAS2R7
HOVERGENQ9NYW3
HOGENOMQ9NYW3
Homologs : HomoloGeneTAS2R7
Homology/Alignments : Family Browser (UCSC)TAS2R7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTAS2R7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TAS2R7
dbVarTAS2R7
ClinVarTAS2R7
1000_GenomesTAS2R7 
Exome Variant ServerTAS2R7
ExAC (Exome Aggregation Consortium)TAS2R7 (select the gene name)
Genetic variants : HAPMAP50837
Genomic Variants (DGV)TAS2R7 [DGVbeta]
DECIPHERTAS2R7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTAS2R7 
Mutations
ICGC Data PortalTAS2R7 
TCGA Data PortalTAS2R7 
Broad Tumor PortalTAS2R7
OASIS PortalTAS2R7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTAS2R7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTAS2R7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TAS2R7
DgiDB (Drug Gene Interaction Database)TAS2R7
DoCM (Curated mutations)TAS2R7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TAS2R7 (select a term)
intoGenTAS2R7
Cancer3DTAS2R7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604793   
Orphanet
MedgenTAS2R7
Genetic Testing Registry TAS2R7
NextProtQ9NYW3 [Medical]
TSGene50837
GENETestsTAS2R7
Huge Navigator TAS2R7 [HugePedia]
snp3D : Map Gene to Disease50837
BioCentury BCIQTAS2R7
ClinGenTAS2R7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD50837
Chemical/Pharm GKB GenePA37925
Clinical trialTAS2R7
Miscellaneous
canSAR (ICR)TAS2R7 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTAS2R7
EVEXTAS2R7
GoPubMedTAS2R7
iHOPTAS2R7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:57:25 CEST 2017

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