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TASP1 (taspase, threonine aspartase, 1)

Identity

Other namesC20orf13
dJ585I14.2
HGNC (Hugo) TASP1
LocusID (NCBI) 55617
Location 20p12.1
Location_base_pair Starts at 13370036 and ends at 13619583 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)TASP1   15859
Entrez_Gene (NCBI)TASP1  55617  taspase, threonine aspartase, 1
Cards
GeneCards (Weizmann)TASP1
Ensembl (Hinxton)ENSG00000089123 [Gene_View]  chr20:13370036-13619583 [Contig_View]  TASP1 [Vega]
AceView (NCBI)TASP1
Genatlas (Paris)TASP1
SOURCE (Stanford)NM_017714
Genomic and cartography
GoldenPath (UCSC)TASP1  -  20p12.1   chr20:13370036-13619583 -  20p12.1   [Description]    (hg19-Feb_2009)
EnsemblTASP1 - 20p12.1 [CytoView]
Mapping of homologs : NCBITASP1 [Mapview]
OMIM608270   
Gene and transcription
Genbank (Entrez)AK000219 AK025671 AK299940 AK304488 AK316311
RefSeq transcript (SRS)NM_017714
RefSeq transcript (Entrez)NM_017714
RefSeq genomic (SRS)AC_000152 NC_000020 NC_018931 NT_011387 NW_001838652 NW_004078100
RefSeq genomic (Entrez)AC_000152 NC_000020 NC_018931 NT_011387 NW_001838652 NW_004078100
Consensus coding sequences : CCDS (NCBI)TASP1
Cluster EST : UnigeneHs.348297 [ SRS ] Hs.348297 [ NCBI ]
CGAP (NCI)Hs.348297
Alternative Splicing : Fast-db (Paris)GSHG0019018
Alternative Splicing GalleryENSG00000089123
Gene ExpressionTASP1 [ NCBI-GEO ]   TASP1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H6P5 (SRS) Q9H6P5 (Uniprot)
NextProtQ9H6P5
With graphics : InterProQ9H6P5
Splice isoforms : SwissVarQ9H6P5(Swissvar)
Domains : Interpro (SRS)Peptidase_T2   
Domains : Interpro (EBI)Peptidase_T2   
Related proteins : CluSTrQ9H6P5
Domain families : Pfam (SRS)Asparaginase_2 (PF01112)   
Domain families : Pfam (Sanger)Asparaginase_2 (PF01112)   
Domain families : Pfam (NCBI)pfam01112   
DMDM55617
Blocks (Seattle)Q9H6P5
PDB (SRS)2A8I    2A8J    2A8L    2A8M   
PDB (PDBSum)2A8I    2A8J    2A8L    2A8M   
PDB (IMB)2A8I    2A8J    2A8L    2A8M   
PDB (RSDB)2A8I    2A8J    2A8L    2A8M   
Human Protein AtlasENSG00000089123
HPRD07460
IPIIPI00302837   IPI00922920   IPI00921872   IPI00642142   IPI00515120   
Protein Interaction databases
DIP (DOE-UCLA)Q9H6P5
IntAct (EBI)Q9H6P5
FunCoupENSG00000089123
REACTOMETASP1
Protein Interaction Database55617
BioGRIDTASP1
InParanoidQ9H6P5
Interologous Interaction database Q9H6P5
IntegromeDBTASP1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)TASP1
SNP (GeneSNP Utah)TASP1
SNP : HGBaseTASP1
Genetic variants : HAPMAPTASP1
Somatic Mutations in Cancer : COSMICTASP1 
CONAN: Copy Number AnalysisTASP1 
Mutations and Diseases : HGMDTASP1
OMIM608270   
GENETests608270   
Disease Genetic AssociationTASP1
Huge Navigator TASP1 [HugePedia]  TASP1 [HugeCancerGEM]
Genomic VariantsTASP1  TASP1 [DGVbeta]
snp3D : Map Gene to Disease55617
General knowledge
Homologs : HomoloGeneTASP1
Homology/Alignments : Family Browser (UCSC)TASP1
Phylogenetic Trees/Animal Genes : TreeFamTASP1
Catalytic activity : Enzyme3.4.25.- [ Enzyme-Expasy ]   3.4.25.- [ Enzyme-SRS ]   3.4.25.- [ IntEnz-EBI ]   3.4.25.- [ BRENDA ]   3.4.25.- [ KEGG ]   
Chemical/Protein Interactions : CTD55617
Chemical/Pharm GKB GenePA25671
Clinical trialTASP1
Cancer Resource (Charite)ENSG00000089123
Ontology : AmiGOthreonine-type endopeptidase activity  proteolysis  positive regulation of transcription, DNA-dependent  
Ontology : EGO-EBIthreonine-type endopeptidase activity  proteolysis  positive regulation of transcription, DNA-dependent  
Other databases
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
PubGeneTASP1
iHOPTASP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:30:56 CEST 2013
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