Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TAZ (tafazzin)

Identity

Other namesBTHS
CMD3A
EFE
EFE2
G4.5
LVNCX
Taz1
HGNC (Hugo) TAZ
LocusID (NCBI) 6901
Location Xq28
Location_base_pair Starts at 153639877 and ends at 153650063 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)TAZ   11577
Cards
Entrez_Gene (NCBI)TAZ  6901  tafazzin
GeneCards (Weizmann)TAZ
Ensembl (Hinxton)ENSG00000102125 [Gene_View]  chrX:153639877-153650063 [Contig_View]  TAZ [Vega]
ICGC DataPortalENSG00000102125
AceView (NCBI)TAZ
Genatlas (Paris)TAZ
WikiGenes6901
SOURCE (Princeton)NM_000116 NM_181311 NM_181312 NM_181313 NM_181314
Genomic and cartography
GoldenPath (UCSC)TAZ  -  Xq28   chrX:153639877-153650063 +  Xq28   [Description]    (hg19-Feb_2009)
EnsemblTAZ - Xq28 [CytoView]
Mapping of homologs : NCBITAZ [Mapview]
OMIM300394   302060   
Gene and transcription
Genbank (Entrez)AK130900 AK291848 AM392997 AM393205 AY231461
RefSeq transcript (Entrez)NM_000116 NM_181311 NM_181312 NM_181313 NM_181314
RefSeq genomic (Entrez)AC_000155 NC_000023 NC_018934 NG_009634 NT_011681 NW_001842419 NW_004929448
Consensus coding sequences : CCDS (NCBI)TAZ
Cluster EST : UnigeneHs.409911 [ NCBI ]
CGAP (NCI)Hs.409911
Alternative Splicing : Fast-db (Paris)GSHG0031921
Alternative Splicing GalleryENSG00000102125
Gene ExpressionTAZ [ NCBI-GEO ]     TAZ [ SEEK ]   TAZ [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ16635 (Uniprot)
NextProtQ16635  [Medical]
With graphics : InterProQ16635
Splice isoforms : SwissVarQ16635 (Swissvar)
Domains : Interpro (EBI)Plipid/glycerol_acylTrfase    Tafazzin   
Related proteins : CluSTrQ16635
Domain families : Pfam (Sanger)Acyltransferase (PF01553)   
Domain families : Pfam (NCBI)pfam01553   
Domain families : Smart (EMBL)PlsC (SM00563)  
DMDM Disease mutations6901
Blocks (Seattle)Q16635
Human Protein AtlasENSG00000102125
Peptide AtlasQ16635
HPRD02316
IPIIPI00470369   IPI00470561   IPI00470562   IPI00329790   IPI00470564   IPI00329274   IPI00329788   IPI00470566   IPI00446998   IPI01011514   IPI00747887   IPI00877779   IPI00880075   IPI00877602   IPI00926694   
Protein Interaction databases
DIP (DOE-UCLA)Q16635
IntAct (EBI)Q16635
FunCoupENSG00000102125
BioGRIDTAZ
IntegromeDBTAZ
STRING (EMBL)TAZ
Ontologies - Pathways
QuickGOQ16635
Ontology : AmiGOmitochondrion  mitochondrion  mitochondrial inner membrane  phospholipid metabolic process  muscle contraction  heart development  skeletal muscle tissue development  integral component of membrane  hemopoiesis  cardiolipin biosynthetic process  mitochondrial respiratory chain complex I assembly  cardiolipin acyl-chain remodeling  cristae formation  mitochondrial ATP synthesis coupled electron transport  small molecule metabolic process  glycerophospholipid biosynthetic process  1-acylglycerophosphocholine O-acyltransferase activity  cardiac muscle tissue development  cardiac muscle contraction  
Ontology : EGO-EBImitochondrion  mitochondrion  mitochondrial inner membrane  phospholipid metabolic process  muscle contraction  heart development  skeletal muscle tissue development  integral component of membrane  hemopoiesis  cardiolipin biosynthetic process  mitochondrial respiratory chain complex I assembly  cardiolipin acyl-chain remodeling  cristae formation  mitochondrial ATP synthesis coupled electron transport  small molecule metabolic process  glycerophospholipid biosynthetic process  1-acylglycerophosphocholine O-acyltransferase activity  cardiac muscle tissue development  cardiac muscle contraction  
Pathways : KEGGGlycerophospholipid metabolism   
Protein Interaction DatabaseTAZ
Wikipedia pathwaysTAZ
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)TAZ
SNP (GeneSNP Utah)TAZ
SNP : HGBaseTAZ
Genetic variants : HAPMAPTAZ
1000_GenomesTAZ 
ICGC programENSG00000102125 
CONAN: Copy Number AnalysisTAZ 
Somatic Mutations in Cancer : COSMICTAZ 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)Zhejiang University Center for Genetic and Genomic Medicine (ZJU-CGGM)
LOVD (Leiden Open Variation Database)**PUBLIC** CCHMC Molecular Genetics Laboratory Mutation Database
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
DECIPHER (Syndromes)X:153639877-153650063
Mutations and Diseases : HGMDTAZ
OMIM300394    302060   
MedgenTAZ
GENETestsTAZ
Disease Genetic AssociationTAZ
Huge Navigator TAZ [HugePedia]  TAZ [HugeCancerGEM]
Genomic VariantsTAZ  TAZ [DGVbeta]
Exome VariantTAZ
dbVarTAZ
ClinVarTAZ
snp3D : Map Gene to Disease6901
General knowledge
Homologs : HomoloGeneTAZ
Homology/Alignments : Family Browser (UCSC)TAZ
Phylogenetic Trees/Animal Genes : TreeFamTAZ
Chemical/Protein Interactions : CTD6901
Chemical/Pharm GKB GenePA36341
Clinical trialTAZ
Cancer Resource (Charite)ENSG00000102125
Other databases
Probes
Litterature
PubMed57 Pubmed reference(s) in Entrez
CoreMineTAZ
GoPubMedTAZ
iHOPTAZ
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Nov 8 18:00:36 CET 2014

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