Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TBC1D22A (TBC1 domain family member 22A)

Identity

Alias (NCBI)C22orf4
HSC79E021
HGNC (Hugo) TBC1D22A
HGNC Previous nameC22orf4
HGNC Previous namechromosome 22 open reading frame 4
 TBC1 domain family, member 22A
LocusID (NCBI) 25771
Atlas_Id 56009
Location 22q13.31  [Link to chromosome band 22q13]
Location_base_pair Starts at 46762650 and ends at 47175692 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CGNL1 (15q21.3) / TBC1D22A (22q13.31)POC1A (3p21.2) / TBC1D22A (22q13.31)TBC1D22A (22q13.31) / BACH2 (6q15)
TBC1D22A (22q13.31) / GCAT (22q13.1)TBC1D22A (22q13.31) / GKN1 (2p13.3)TBC1D22A (22q13.31) / GRAMD4 (22q13.31)
TBC1D22A (22q13.31) / GRAP2 (22q13.1)TBC1D22A (22q13.31) / OTUD7A (15q13.3)TBC1D22A (22q13.31) / POLDIP3 (22q13.2)
TBC1D22A (22q13.31) / PRG3 (11q12.1)TBC1D22A (22q13.31) / RIBC2 (22q13.31)TBC1D22A (22q13.31) / TSPAN4 (11p15.5)
TBCE (1q42.3) / TBC1D22A (22q13.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TBC1D22A   1309
Cards
Entrez_Gene (NCBI)TBC1D22A    TBC1 domain family member 22A
AliasesC22orf4; HSC79E021
GeneCards (Weizmann)TBC1D22A
Ensembl hg19 (Hinxton)ENSG00000054611 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000054611 [Gene_View]  ENSG00000054611 [Sequence]  chr22:46762650-47175692 [Contig_View]  TBC1D22A [Vega]
ICGC DataPortalENSG00000054611
TCGA cBioPortalTBC1D22A
AceView (NCBI)TBC1D22A
Genatlas (Paris)TBC1D22A
SOURCE (Princeton)TBC1D22A
Genetics Home Reference (NIH)TBC1D22A
Genomic and cartography
GoldenPath hg38 (UCSC)TBC1D22A  -     chr22:46762650-47175692 +  22q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TBC1D22A  -     22q13.31   [Description]    (hg19-Feb_2009)
GoldenPathTBC1D22A - 22q13.31 [CytoView hg19]  TBC1D22A - 22q13.31 [CytoView hg38]
ImmunoBaseENSG00000054611
Genome Data Viewer NCBITBC1D22A [Mapview hg19]  
OMIM616879   
Gene and transcription
Genbank (Entrez)AB449908 AK000851 AK055591 AK125705 AK127653
RefSeq transcript (Entrez)NM_001284303 NM_001284304 NM_001284305 NM_014346
Consensus coding sequences : CCDS (NCBI)TBC1D22A
Gene ExpressionTBC1D22A [ NCBI-GEO ]   TBC1D22A [ EBI - ARRAY_EXPRESS ]   TBC1D22A [ SEEK ]   TBC1D22A [ MEM ]
Gene Expression Viewer (FireBrowse)TBC1D22A [ Firebrowse - Broad ]
GenevisibleExpression of TBC1D22A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25771
GTEX Portal (Tissue expression)TBC1D22A
Human Protein AtlasENSG00000054611-TBC1D22A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TBC1D22A
Human Protein Atlas [tissue]ENSG00000054611-TBC1D22A [tissue]
HPRD15474
Protein Interaction databases
BioGRIDTBC1D22A
STRING (EMBL)TBC1D22A
ZODIACTBC1D22A
Ontologies - Pathways
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTBC1D22A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:34:21 CEST 2021

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