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TBC1D26 (TBC1 domain family member 26)

Identity

Alias_namesTBC1 domain family
Alias_symbol (synonym)MGC51025
Other alias-
HGNC (Hugo) TBC1D26
LocusID (NCBI) 353149
Atlas_Id 56059
Location 17p12  [Link to chromosome band 17p12]
Location_base_pair Starts at 15732277 and ends at 15744784 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PIGL (17p11.2) / TBC1D26 (17p12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TBC1D26   28745
Cards
Entrez_Gene (NCBI)TBC1D26  353149  TBC1 domain family member 26
Aliases
GeneCards (Weizmann)TBC1D26
Ensembl hg19 (Hinxton)ENSG00000214946 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214946 [Gene_View]  chr17:15732277-15744784 [Contig_View]  TBC1D26 [Vega]
ICGC DataPortalENSG00000214946
TCGA cBioPortalTBC1D26
AceView (NCBI)TBC1D26
Genatlas (Paris)TBC1D26
WikiGenes353149
SOURCE (Princeton)TBC1D26
Genetics Home Reference (NIH)TBC1D26
Genomic and cartography
GoldenPath hg38 (UCSC)TBC1D26  -     chr17:15732277-15744784 +  17p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TBC1D26  -     17p12   [Description]    (hg19-Feb_2009)
EnsemblTBC1D26 - 17p12 [CytoView hg19]  TBC1D26 - 17p12 [CytoView hg38]
Mapping of homologs : NCBITBC1D26 [Mapview hg19]  TBC1D26 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB449913 AI631546 AK292544 AK315847 BC028414
RefSeq transcript (Entrez)NM_178571
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TBC1D26
Cluster EST : UnigeneHs.567880 [ NCBI ]
CGAP (NCI)Hs.567880
Alternative Splicing GalleryENSG00000214946
Gene ExpressionTBC1D26 [ NCBI-GEO ]   TBC1D26 [ EBI - ARRAY_EXPRESS ]   TBC1D26 [ SEEK ]   TBC1D26 [ MEM ]
Gene Expression Viewer (FireBrowse)TBC1D26 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)353149
GTEX Portal (Tissue expression)TBC1D26
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86UD7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86UD7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86UD7
Splice isoforms : SwissVarQ86UD7
PhosPhoSitePlusQ86UD7
Domaine pattern : Prosite (Expaxy)TBC_RABGAP (PS50086)   
Domains : Interpro (EBI)Rab-GTPase-TBC_dom   
Domain families : Pfam (Sanger)RabGAP-TBC (PF00566)   
Domain families : Pfam (NCBI)pfam00566   
Domain families : Smart (EMBL)TBC (SM00164)  
Conserved Domain (NCBI)TBC1D26
DMDM Disease mutations353149
Blocks (Seattle)TBC1D26
SuperfamilyQ86UD7
Human Protein AtlasENSG00000214946
Peptide AtlasQ86UD7
HPRD14670
IPIIPI00478049   IPI00893820   IPI00641942   IPI00976022   IPI00973376   
Protein Interaction databases
DIP (DOE-UCLA)Q86UD7
IntAct (EBI)Q86UD7
FunCoupENSG00000214946
BioGRIDTBC1D26
STRING (EMBL)TBC1D26
ZODIACTBC1D26
Ontologies - Pathways
QuickGOQ86UD7
Ontology : AmiGOGTPase activator activity  intracellular  intracellular protein transport  endomembrane system  Rab GTPase binding  regulation of vesicle fusion  activation of GTPase activity  
Ontology : EGO-EBIGTPase activator activity  intracellular  intracellular protein transport  endomembrane system  Rab GTPase binding  regulation of vesicle fusion  activation of GTPase activity  
NDEx NetworkTBC1D26
Atlas of Cancer Signalling NetworkTBC1D26
Wikipedia pathwaysTBC1D26
Orthology - Evolution
OrthoDB353149
GeneTree (enSembl)ENSG00000214946
Phylogenetic Trees/Animal Genes : TreeFamTBC1D26
HOVERGENQ86UD7
HOGENOMQ86UD7
Homologs : HomoloGeneTBC1D26
Homology/Alignments : Family Browser (UCSC)TBC1D26
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTBC1D26 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TBC1D26
dbVarTBC1D26
ClinVarTBC1D26
1000_GenomesTBC1D26 
Exome Variant ServerTBC1D26
ExAC (Exome Aggregation Consortium)TBC1D26 (select the gene name)
Genetic variants : HAPMAP353149
Genomic Variants (DGV)TBC1D26 [DGVbeta]
DECIPHERTBC1D26 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTBC1D26 
Mutations
ICGC Data PortalTBC1D26 
TCGA Data PortalTBC1D26 
Broad Tumor PortalTBC1D26
OASIS PortalTBC1D26 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTBC1D26  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTBC1D26
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TBC1D26
DgiDB (Drug Gene Interaction Database)TBC1D26
DoCM (Curated mutations)TBC1D26 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TBC1D26 (select a term)
intoGenTBC1D26
Cancer3DTBC1D26(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTBC1D26
Genetic Testing Registry TBC1D26
NextProtQ86UD7 [Medical]
TSGene353149
GENETestsTBC1D26
Target ValidationTBC1D26
Huge Navigator TBC1D26 [HugePedia]
snp3D : Map Gene to Disease353149
BioCentury BCIQTBC1D26
ClinGenTBC1D26
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD353149
Chemical/Pharm GKB GenePA162405218
Clinical trialTBC1D26
Miscellaneous
canSAR (ICR)TBC1D26 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTBC1D26
EVEXTBC1D26
GoPubMedTBC1D26
iHOPTBC1D26
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:16:27 CEST 2017

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