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TBC1D29P (TBC1 domain family member 29, pseudogene)

Identity

Alias (NCBI)TBC1D29
HGNC (Hugo) TBC1D29P
HGNC Alias symbDKFZP434O047
HGNC Previous nameTBC1 domain family, member 29
LocusID (NCBI) 26083
Atlas_Id 74528
Location 17q11.2  [Link to chromosome band 17q11]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

 

Nomenclature
HGNC (Hugo)TBC1D29P   24509
Cards
Entrez_Gene (NCBI)TBC1D29P    TBC1 domain family member 29, pseudogene
AliasesTBC1D29
GeneCards (Weizmann)TBC1D29P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  TBC1D29P [Vega]
TCGA cBioPortalTBC1D29P
AceView (NCBI)TBC1D29P
Genatlas (Paris)TBC1D29P
SOURCE (Princeton)TBC1D29P
Genetics Home Reference (NIH)TBC1D29P
Genomic and cartography
GoldenPath hg38 (UCSC)TBC1D29P  -  
GoldenPath hg19 (UCSC)TBC1D29P  -  
GoldenPathTBC1D29P - [CytoView hg19]  TBC1D29P - [CytoView hg38]
Genome Data Viewer NCBITBC1D29P [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AL117394 BC096718 BC098126 BC098273
RefSeq transcript (Entrez)NM_015594
Consensus coding sequences : CCDS (NCBI)TBC1D29P
Gene ExpressionTBC1D29P [ NCBI-GEO ]   TBC1D29P [ EBI - ARRAY_EXPRESS ]   TBC1D29P [ SEEK ]   TBC1D29P [ MEM ]
Gene Expression Viewer (FireBrowse)TBC1D29P [ Firebrowse - Broad ]
GenevisibleExpression of TBC1D29P in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26083
GTEX Portal (Tissue expression)TBC1D29P
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UFV1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UFV1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UFV1
PhosPhoSitePlusQ9UFV1
Domaine pattern : Prosite (Expaxy)TBC_RABGAP (PS50086)   
Domains : Interpro (EBI)Rab-GTPase-TBC_dom    Rab-GTPase_TBC_sf   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TBC1D29P
SuperfamilyQ9UFV1
AlphaFold pdb e-kbQ9UFV1   
HPRD13162
Protein Interaction databases
DIP (DOE-UCLA)Q9UFV1
IntAct (EBI)Q9UFV1
BioGRIDTBC1D29P
STRING (EMBL)TBC1D29P
ZODIACTBC1D29P
Ontologies - Pathways
QuickGOQ9UFV1
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkTBC1D29P
Atlas of Cancer Signalling NetworkTBC1D29P
Wikipedia pathwaysTBC1D29P
Orthology - Evolution
OrthoDB26083
Phylogenetic Trees/Animal Genes : TreeFamTBC1D29P
Homologs : HomoloGeneTBC1D29P
Homology/Alignments : Family Browser (UCSC)TBC1D29P
Gene fusions - Rearrangements
Fusion : QuiverTBC1D29P
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTBC1D29P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TBC1D29P
dbVarTBC1D29P
ClinVarTBC1D29P
MonarchTBC1D29P
1000_GenomesTBC1D29P 
Exome Variant ServerTBC1D29P
Varsome BrowserTBC1D29P
ACMGTBC1D29P variants
VarityQ9UFV1
Genomic Variants (DGV)TBC1D29P [DGVbeta]
DECIPHERTBC1D29P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTBC1D29P 
Mutations
ICGC Data PortalTBC1D29P 
TCGA Data PortalTBC1D29P 
Broad Tumor PortalTBC1D29P
OASIS PortalTBC1D29P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTBC1D29P
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTBC1D29P
DgiDB (Drug Gene Interaction Database)TBC1D29P
DoCM (Curated mutations)TBC1D29P
CIViC (Clinical Interpretations of Variants in Cancer)TBC1D29P
Cancer3DTBC1D29P
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTBC1D29P
MedgenTBC1D29P
Genetic Testing Registry TBC1D29P
NextProtQ9UFV1 [Medical]
GENETestsTBC1D29P
Target ValidationTBC1D29P
Huge Navigator TBC1D29P [HugePedia]
ClinGenTBC1D29P
Clinical trials, drugs, therapy
MyCancerGenomeTBC1D29P
Protein Interactions : CTDTBC1D29P
Pharm GKB GenePA162405312
PharosQ9UFV1
Clinical trialTBC1D29P
Miscellaneous
canSAR (ICR)TBC1D29P
HarmonizomeTBC1D29P
DataMed IndexTBC1D29P
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTBC1D29P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:24:56 CEST 2021

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