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TBC1D3G (TBC1 domain family member 3G)

Identity

Other alias-
HGNC (Hugo) TBC1D3G
LocusID (NCBI) 101060321
Atlas_Id 56733
Location 17q12  [Link to chromosome band 17q12]
Location_base_pair Starts at 36165681 and ends at 36176578 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TBC1D3G   29860
Cards
Entrez_Gene (NCBI)TBC1D3G  101060321  TBC1 domain family member 3G
Aliases
GeneCards (Weizmann)TBC1D3G
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:36165681-36176578 [Contig_View]  TBC1D3G [Vega]
TCGA cBioPortalTBC1D3G
AceView (NCBI)TBC1D3G
Genatlas (Paris)TBC1D3G
WikiGenes101060321
SOURCE (Princeton)TBC1D3G
Genetics Home Reference (NIH)TBC1D3G
Genomic and cartography
GoldenPath hg38 (UCSC)TBC1D3G  -     chr17:36165681-36176578 -  17q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TBC1D3G  -     17q12   [Description]    (hg19-Feb_2009)
EnsemblTBC1D3G - 17q12 [CytoView hg19]  TBC1D3G - 17q12 [CytoView hg38]
Mapping of homologs : NCBITBC1D3G [Mapview hg19]  TBC1D3G [Mapview hg38]
OMIM610810   
Gene and transcription
Genbank (Entrez)AK292308 AK301823 BC033670 BC071680
RefSeq transcript (Entrez)NM_001291462
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_187614
Consensus coding sequences : CCDS (NCBI)TBC1D3G
Cluster EST : UnigeneHs.454716 [ NCBI ]
CGAP (NCI)Hs.454716
Gene ExpressionTBC1D3G [ NCBI-GEO ]   TBC1D3G [ EBI - ARRAY_EXPRESS ]   TBC1D3G [ SEEK ]   TBC1D3G [ MEM ]
Gene Expression Viewer (FireBrowse)TBC1D3G [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101060321
GTEX Portal (Tissue expression)TBC1D3G
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6DHY5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6DHY5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6DHY5
Splice isoforms : SwissVarQ6DHY5
PhosPhoSitePlusQ6DHY5
Domaine pattern : Prosite (Expaxy)TBC_RABGAP (PS50086)   
Domains : Interpro (EBI)Rab-GTPase-TBC_dom   
Domain families : Pfam (Sanger)RabGAP-TBC (PF00566)   
Domain families : Pfam (NCBI)pfam00566   
Domain families : Smart (EMBL)TBC (SM00164)  
Conserved Domain (NCBI)TBC1D3G
DMDM Disease mutations101060321
Blocks (Seattle)TBC1D3G
SuperfamilyQ6DHY5
Peptide AtlasQ6DHY5
Protein Interaction databases
DIP (DOE-UCLA)Q6DHY5
IntAct (EBI)Q6DHY5
BioGRIDTBC1D3G
STRING (EMBL)TBC1D3G
ZODIACTBC1D3G
Ontologies - Pathways
QuickGOQ6DHY5
Ontology : AmiGOGTPase activator activity  intracellular  plasma membrane  intracellular protein transport  endomembrane system  Rab GTPase binding  regulation of vesicle fusion  activation of GTPase activity  
Ontology : EGO-EBIGTPase activator activity  intracellular  plasma membrane  intracellular protein transport  endomembrane system  Rab GTPase binding  regulation of vesicle fusion  activation of GTPase activity  
NDEx NetworkTBC1D3G
Atlas of Cancer Signalling NetworkTBC1D3G
Wikipedia pathwaysTBC1D3G
Orthology - Evolution
OrthoDB101060321
Phylogenetic Trees/Animal Genes : TreeFamTBC1D3G
HOVERGENQ6DHY5
HOGENOMQ6DHY5
Homologs : HomoloGeneTBC1D3G
Homology/Alignments : Family Browser (UCSC)TBC1D3G
Gene fusions - Rearrangements
Tumor Fusion PortalTBC1D3G
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTBC1D3G [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TBC1D3G
dbVarTBC1D3G
ClinVarTBC1D3G
1000_GenomesTBC1D3G 
Exome Variant ServerTBC1D3G
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP101060321
Genomic Variants (DGV)TBC1D3G [DGVbeta]
DECIPHERTBC1D3G [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTBC1D3G 
Mutations
ICGC Data PortalTBC1D3G 
TCGA Data PortalTBC1D3G 
Broad Tumor PortalTBC1D3G
OASIS PortalTBC1D3G [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTBC1D3G
BioMutasearch TBC1D3G
DgiDB (Drug Gene Interaction Database)TBC1D3G
DoCM (Curated mutations)TBC1D3G (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TBC1D3G (select a term)
intoGenTBC1D3G
Cancer3DTBC1D3G(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610810   
Orphanet
DisGeNETTBC1D3G
MedgenTBC1D3G
Genetic Testing Registry TBC1D3G
NextProtQ6DHY5 [Medical]
TSGene101060321
GENETestsTBC1D3G
Target ValidationTBC1D3G
Huge Navigator TBC1D3G [HugePedia]
snp3D : Map Gene to Disease101060321
BioCentury BCIQTBC1D3G
ClinGenTBC1D3G
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101060321
Chemical/Pharm GKB GenePA145007622
Clinical trialTBC1D3G
Miscellaneous
canSAR (ICR)TBC1D3G (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTBC1D3G
EVEXTBC1D3G
GoPubMedTBC1D3G
iHOPTBC1D3G
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:37:48 CET 2017

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