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TBC1D3L (TBC1 domain family member 3L)

Identity

Alias_namesTBC1 domain family, member 3L
Other alias-
HGNC (Hugo) TBC1D3L
LocusID (NCBI) 101060376
Atlas_Id 74533
Location 17q12  [Link to chromosome band 17q12]
Location_base_pair Starts at 36165681 and ends at 36176592 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TBC1D3L   51246
Cards
Entrez_Gene (NCBI)TBC1D3L  101060376  TBC1 domain family member 3L
Aliases
GeneCards (Weizmann)TBC1D3L
Ensembl hg19 (Hinxton)ENSG00000274512 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000274512 [Gene_View]  chr17:36165681-36176592 [Contig_View]  TBC1D3L [Vega]
ICGC DataPortalENSG00000274512
TCGA cBioPortalTBC1D3L
AceView (NCBI)TBC1D3L
Genatlas (Paris)TBC1D3L
WikiGenes101060376
SOURCE (Princeton)TBC1D3L
Genetics Home Reference (NIH)TBC1D3L
Genomic and cartography
GoldenPath hg38 (UCSC)TBC1D3L  -     chr17:36165681-36176592 -  17q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TBC1D3L  -     17q12   [Description]    (hg19-Feb_2009)
EnsemblTBC1D3L - 17q12 [CytoView hg19]  TBC1D3L - 17q12 [CytoView hg38]
Mapping of homologs : NCBITBC1D3L [Mapview hg19]  TBC1D3L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095385 AK122833 AX775949 AX775951
RefSeq transcript (Entrez)NM_001291459
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TBC1D3L
Cluster EST : UnigeneHs.454716 [ NCBI ]
CGAP (NCI)Hs.454716
Alternative Splicing GalleryENSG00000274512
Gene ExpressionTBC1D3L [ NCBI-GEO ]   TBC1D3L [ EBI - ARRAY_EXPRESS ]   TBC1D3L [ SEEK ]   TBC1D3L [ MEM ]
Gene Expression Viewer (FireBrowse)TBC1D3L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101060376
GTEX Portal (Tissue expression)TBC1D3L
Protein : pattern, domain, 3D structure
UniProt/SwissProtB9A6J9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtB9A6J9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProB9A6J9
Splice isoforms : SwissVarB9A6J9
PhosPhoSitePlusB9A6J9
Domaine pattern : Prosite (Expaxy)TBC_RABGAP (PS50086)   
Domains : Interpro (EBI)Rab-GTPase-TBC_dom   
Domain families : Pfam (Sanger)RabGAP-TBC (PF00566)   
Domain families : Pfam (NCBI)pfam00566   
Domain families : Smart (EMBL)TBC (SM00164)  
Conserved Domain (NCBI)TBC1D3L
DMDM Disease mutations101060376
Blocks (Seattle)TBC1D3L
SuperfamilyB9A6J9
Human Protein AtlasENSG00000274512
Peptide AtlasB9A6J9
Protein Interaction databases
DIP (DOE-UCLA)B9A6J9
IntAct (EBI)B9A6J9
FunCoupENSG00000274512
BioGRIDTBC1D3L
STRING (EMBL)TBC1D3L
ZODIACTBC1D3L
Ontologies - Pathways
QuickGOB9A6J9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkTBC1D3L
Atlas of Cancer Signalling NetworkTBC1D3L
Wikipedia pathwaysTBC1D3L
Orthology - Evolution
OrthoDB101060376
GeneTree (enSembl)ENSG00000274512
Phylogenetic Trees/Animal Genes : TreeFamTBC1D3L
HOVERGENB9A6J9
HOGENOMB9A6J9
Homologs : HomoloGeneTBC1D3L
Homology/Alignments : Family Browser (UCSC)TBC1D3L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTBC1D3L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TBC1D3L
dbVarTBC1D3L
ClinVarTBC1D3L
1000_GenomesTBC1D3L 
Exome Variant ServerTBC1D3L
ExAC (Exome Aggregation Consortium)TBC1D3L (select the gene name)
Genetic variants : HAPMAP101060376
Genomic Variants (DGV)TBC1D3L [DGVbeta]
DECIPHERTBC1D3L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTBC1D3L 
Mutations
ICGC Data PortalTBC1D3L 
TCGA Data PortalTBC1D3L 
Broad Tumor PortalTBC1D3L
OASIS PortalTBC1D3L [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTBC1D3L
BioMutasearch TBC1D3L
DgiDB (Drug Gene Interaction Database)TBC1D3L
DoCM (Curated mutations)TBC1D3L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TBC1D3L (select a term)
intoGenTBC1D3L
Cancer3DTBC1D3L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTBC1D3L
Genetic Testing Registry TBC1D3L
NextProtB9A6J9 [Medical]
TSGene101060376
GENETestsTBC1D3L
Target ValidationTBC1D3L
Huge Navigator TBC1D3L [HugePedia]
snp3D : Map Gene to Disease101060376
BioCentury BCIQTBC1D3L
ClinGenTBC1D3L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101060376
Chemical/Pharm GKB GenePA166123745
Clinical trialTBC1D3L
Miscellaneous
canSAR (ICR)TBC1D3L (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTBC1D3L
EVEXTBC1D3L
GoPubMedTBC1D3L
iHOPTBC1D3L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:44:58 CEST 2017

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