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TBC1D8-AS1 (TBC1 domain family member 8 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) TBC1D8-AS1
LocusID (NCBI) 100506286
Atlas_Id 78999
Location 2q11.2  [Link to chromosome band 2q11]
Location_base_pair Starts at 101151660 and ends at 101155412 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TBC1D8-AS1   52782
Cards
Entrez_Gene (NCBI)TBC1D8-AS1  100506286  TBC1 domain family member 8 antisense RNA 1
Aliases
GeneCards (Weizmann)TBC1D8-AS1
Ensembl hg19 (Hinxton)ENSG00000272902 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000272902 [Gene_View]  chr2:101151660-101155412 [Contig_View]  TBC1D8-AS1 [Vega]
ICGC DataPortalENSG00000272902
TCGA cBioPortalTBC1D8-AS1
AceView (NCBI)TBC1D8-AS1
Genatlas (Paris)TBC1D8-AS1
WikiGenes100506286
SOURCE (Princeton)TBC1D8-AS1
Genetics Home Reference (NIH)TBC1D8-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TBC1D8-AS1  -     chr2:101151660-101155412 +  2q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TBC1D8-AS1  -     2q11.2   [Description]    (hg19-Feb_2009)
EnsemblTBC1D8-AS1 - 2q11.2 [CytoView hg19]  TBC1D8-AS1 - 2q11.2 [CytoView hg38]
Mapping of homologs : NCBITBC1D8-AS1 [Mapview hg19]  TBC1D8-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056547 BC014493 BC077729 DA744225
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TBC1D8-AS1
Cluster EST : UnigeneHs.679790 [ NCBI ]
CGAP (NCI)Hs.679790
Alternative Splicing GalleryENSG00000272902
Gene ExpressionTBC1D8-AS1 [ NCBI-GEO ]   TBC1D8-AS1 [ EBI - ARRAY_EXPRESS ]   TBC1D8-AS1 [ SEEK ]   TBC1D8-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TBC1D8-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506286
GTEX Portal (Tissue expression)TBC1D8-AS1
Human Protein AtlasENSG00000272902-TBC1D8-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TBC1D8-AS1
DMDM Disease mutations100506286
Blocks (Seattle)TBC1D8-AS1
Human Protein Atlas [tissue]ENSG00000272902-TBC1D8-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000272902
BioGRIDTBC1D8-AS1
STRING (EMBL)TBC1D8-AS1
ZODIACTBC1D8-AS1
Ontologies - Pathways
Huge Navigator TBC1D8-AS1 [HugePedia]
snp3D : Map Gene to Disease100506286
BioCentury BCIQTBC1D8-AS1
ClinGenTBC1D8-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506286
Clinical trialTBC1D8-AS1
Miscellaneous
canSAR (ICR)TBC1D8-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTBC1D8-AS1
EVEXTBC1D8-AS1
GoPubMedTBC1D8-AS1
iHOPTBC1D8-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:17:26 CET 2017

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