Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TBCD (tubulin folding cofactor D)

Identity

Alias (NCBI)PEBAT
SSD-1
tfcD
HGNC (Hugo) TBCD
HGNC Previous nametubulin-specific chaperone d
LocusID (NCBI) 6904
Atlas_Id 74542
Location 17q25.3  [Link to chromosome band 17q25]
Location_base_pair Starts at 82752065 and ends at 82945914 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BAIAP2 (17q25.3) / TBCD (17q25.3)NPLOC4 (17q25.3) / TBCD (17q25.3)TBCD (17q25.3) / AKR1B1 (7q33)
TBCD (17q25.3) / ASPSCR1 (17q25.3)TBCD (17q25.3) / FOXK2 (17q25.3)TBCD (17q25.3) / NEAT1 (11q13.1)
TBCD (17q25.3) / NFIX (19p13.2)TBCD (17q25.3) / RPTOR (17q25.3)TBCD (17q25.3) / SCARA5 (8p21.1)
TBCD (17q25.3) / SGCD (5q33.3)TBCD (17q25.3) / SLC9A3R1 (17q25.1)TBCD (17q25.3) / TBCD (17q25.3)
TBCD SLC9A3R1TBCD NFIX

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TBCD   11581
Cards
Entrez_Gene (NCBI)TBCD    tubulin folding cofactor D
AliasesPEBAT; SSD-1; tfcD
GeneCards (Weizmann)TBCD
Ensembl hg19 (Hinxton)ENSG00000141556 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000141556 [Gene_View]  ENSG00000141556 [Sequence]  chr17:82752065-82945914 [Contig_View]  TBCD [Vega]
ICGC DataPortalENSG00000141556
TCGA cBioPortalTBCD
AceView (NCBI)TBCD
Genatlas (Paris)TBCD
SOURCE (Princeton)TBCD
Genetics Home Reference (NIH)TBCD
Genomic and cartography
GoldenPath hg38 (UCSC)TBCD  -     chr17:82752065-82945914 +  17q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TBCD  -     17q25.3   [Description]    (hg19-Feb_2009)
GoldenPathTBCD - 17q25.3 [CytoView hg19]  TBCD - 17q25.3 [CytoView hg38]
ImmunoBaseENSG00000141556
Genome Data Viewer NCBITBCD [Mapview hg19]  
OMIM604649   617193   
Gene and transcription
Genbank (Entrez)AA421669 AB023205 AF052173 AF193042 AJ006417
RefSeq transcript (Entrez)NM_001033052 NM_005993
Consensus coding sequences : CCDS (NCBI)TBCD
Gene ExpressionTBCD [ NCBI-GEO ]   TBCD [ EBI - ARRAY_EXPRESS ]   TBCD [ SEEK ]   TBCD [ MEM ]
Gene Expression Viewer (FireBrowse)TBCD [ Firebrowse - Broad ]
GenevisibleExpression of TBCD in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6904
GTEX Portal (Tissue expression)TBCD
Human Protein AtlasENSG00000141556-TBCD [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TBCD
Human Protein Atlas [tissue]ENSG00000141556-TBCD [tissue]
HPRD05227
Protein Interaction databases
BioGRIDTBCD
STRING (EMBL)TBCD
ZODIACTBCD
Ontologies - Pathways
Litterature
PubMed65 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTBCD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:24:58 CEST 2021

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