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TBKBP1 (TBK1 binding protein 1)

Identity

Alias (NCBI)ProSAPiP2
SINTBAD
HGNC (Hugo) TBKBP1
HGNC Alias symbProSAPiP2
KIAA0775
LocusID (NCBI) 9755
Atlas_Id 74544
Location 17q21.32  [Link to chromosome band 17q21]
Location_base_pair Starts at 47695264 and ends at 47712063 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TBKBP1   30140
Cards
Entrez_Gene (NCBI)TBKBP1    TBK1 binding protein 1
AliasesProSAPiP2; SINTBAD
GeneCards (Weizmann)TBKBP1
Ensembl hg19 (Hinxton)ENSG00000198933 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198933 [Gene_View]  ENSG00000198933 [Sequence]  chr17:47695264-47712063 [Contig_View]  TBKBP1 [Vega]
ICGC DataPortalENSG00000198933
TCGA cBioPortalTBKBP1
AceView (NCBI)TBKBP1
Genatlas (Paris)TBKBP1
SOURCE (Princeton)TBKBP1
Genetics Home Reference (NIH)TBKBP1
Genomic and cartography
GoldenPath hg38 (UCSC)TBKBP1  -     chr17:47695264-47712063 +  17q21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TBKBP1  -     17q21.32   [Description]    (hg19-Feb_2009)
GoldenPathTBKBP1 - 17q21.32 [CytoView hg19]  TBKBP1 - 17q21.32 [CytoView hg38]
ImmunoBaseENSG00000198933
Genome Data Viewer NCBITBKBP1 [Mapview hg19]  
OMIM608476   
Gene and transcription
Genbank (Entrez)AB018318 BC111418 BC152407 BC167150 CB241552
RefSeq transcript (Entrez)NM_001394755 NM_001394756 NM_014726
Consensus coding sequences : CCDS (NCBI)TBKBP1
Gene ExpressionTBKBP1 [ NCBI-GEO ]   TBKBP1 [ EBI - ARRAY_EXPRESS ]   TBKBP1 [ SEEK ]   TBKBP1 [ MEM ]
Gene Expression Viewer (FireBrowse)TBKBP1 [ Firebrowse - Broad ]
GenevisibleExpression of TBKBP1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9755
GTEX Portal (Tissue expression)TBKBP1
Human Protein AtlasENSG00000198933-TBKBP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA7MCY6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA7MCY6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA7MCY6
PhosPhoSitePlusA7MCY6
Domaine pattern : Prosite (Expaxy)ZF_UBZ1 (PS51905)   
Domains : Interpro (EBI)CALCOCO1/2_Zn_UBZ1    TBD   
Domain families : Pfam (Sanger)TBD (PF12845)   
Domain families : Pfam (NCBI)pfam12845   
Conserved Domain (NCBI)TBKBP1
SuperfamilyA7MCY6
AlphaFold pdb e-kbA7MCY6   
Human Protein Atlas [tissue]ENSG00000198933-TBKBP1 [tissue]
HPRD12239
Protein Interaction databases
DIP (DOE-UCLA)A7MCY6
IntAct (EBI)A7MCY6
BioGRIDTBKBP1
STRING (EMBL)TBKBP1
ZODIACTBKBP1
Ontologies - Pathways
QuickGOA7MCY6
Ontology : AmiGOprotein binding  cytoplasm  I-kappaB kinase/NF-kappaB signaling  innate immune response  metal ion binding  
Ontology : EGO-EBIprotein binding  cytoplasm  I-kappaB kinase/NF-kappaB signaling  innate immune response  metal ion binding  
NDEx NetworkTBKBP1
Atlas of Cancer Signalling NetworkTBKBP1
Wikipedia pathwaysTBKBP1
Orthology - Evolution
OrthoDB9755
GeneTree (enSembl)ENSG00000198933
Phylogenetic Trees/Animal Genes : TreeFamTBKBP1
Homologs : HomoloGeneTBKBP1
Homology/Alignments : Family Browser (UCSC)TBKBP1
Gene fusions - Rearrangements
Fusion : QuiverTBKBP1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTBKBP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TBKBP1
dbVarTBKBP1
ClinVarTBKBP1
MonarchTBKBP1
1000_GenomesTBKBP1 
Exome Variant ServerTBKBP1
GNOMAD BrowserENSG00000198933
Varsome BrowserTBKBP1
ACMGTBKBP1 variants
VarityA7MCY6
Genomic Variants (DGV)TBKBP1 [DGVbeta]
DECIPHERTBKBP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTBKBP1 
Mutations
ICGC Data PortalTBKBP1 
TCGA Data PortalTBKBP1 
Broad Tumor PortalTBKBP1
OASIS PortalTBKBP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTBKBP1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTBKBP1
Mutations and Diseases : HGMDTBKBP1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTBKBP1
DgiDB (Drug Gene Interaction Database)TBKBP1
DoCM (Curated mutations)TBKBP1
CIViC (Clinical Interpretations of Variants in Cancer)TBKBP1
Cancer3DTBKBP1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608476   
Orphanet
DisGeNETTBKBP1
MedgenTBKBP1
Genetic Testing Registry TBKBP1
NextProtA7MCY6 [Medical]
GENETestsTBKBP1
Target ValidationTBKBP1
Huge Navigator TBKBP1 [HugePedia]
ClinGenTBKBP1
Clinical trials, drugs, therapy
MyCancerGenomeTBKBP1
Protein Interactions : CTDTBKBP1
Pharm GKB GenePA142670830
PharosA7MCY6
Clinical trialTBKBP1
Miscellaneous
canSAR (ICR)TBKBP1
HarmonizomeTBKBP1
DataMed IndexTBKBP1
Probes
Litterature
PubMed37 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTBKBP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:24:59 CEST 2021

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