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TBKBP1 (TBK1 binding protein 1)

Identity

Alias_symbol (synonym)ProSAPiP2
KIAA0775
Other aliasSINTBAD
HGNC (Hugo) TBKBP1
LocusID (NCBI) 9755
Atlas_Id 74544
Location 17q21.32  [Link to chromosome band 17q21]
Location_base_pair Starts at 47695264 and ends at 47712063 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TBKBP1   30140
Cards
Entrez_Gene (NCBI)TBKBP1  9755  TBK1 binding protein 1
AliasesProSAPiP2; SINTBAD
GeneCards (Weizmann)TBKBP1
Ensembl hg19 (Hinxton)ENSG00000198933 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198933 [Gene_View]  chr17:47695264-47712063 [Contig_View]  TBKBP1 [Vega]
ICGC DataPortalENSG00000198933
TCGA cBioPortalTBKBP1
AceView (NCBI)TBKBP1
Genatlas (Paris)TBKBP1
WikiGenes9755
SOURCE (Princeton)TBKBP1
Genetics Home Reference (NIH)TBKBP1
Genomic and cartography
GoldenPath hg38 (UCSC)TBKBP1  -     chr17:47695264-47712063 +  17q21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TBKBP1  -     17q21.32   [Description]    (hg19-Feb_2009)
EnsemblTBKBP1 - 17q21.32 [CytoView hg19]  TBKBP1 - 17q21.32 [CytoView hg38]
Mapping of homologs : NCBITBKBP1 [Mapview hg19]  TBKBP1 [Mapview hg38]
OMIM608476   
Gene and transcription
Genbank (Entrez)AB018318 BC111418 BC152407 BC167150 CB241552
RefSeq transcript (Entrez)NM_014726
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TBKBP1
Cluster EST : UnigeneHs.94790 [ NCBI ]
CGAP (NCI)Hs.94790
Alternative Splicing GalleryENSG00000198933
Gene ExpressionTBKBP1 [ NCBI-GEO ]   TBKBP1 [ EBI - ARRAY_EXPRESS ]   TBKBP1 [ SEEK ]   TBKBP1 [ MEM ]
Gene Expression Viewer (FireBrowse)TBKBP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9755
GTEX Portal (Tissue expression)TBKBP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtA7MCY6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA7MCY6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA7MCY6
Splice isoforms : SwissVarA7MCY6
PhosPhoSitePlusA7MCY6
Domains : Interpro (EBI)TBD   
Domain families : Pfam (Sanger)TBD (PF12845)   
Domain families : Pfam (NCBI)pfam12845   
Conserved Domain (NCBI)TBKBP1
DMDM Disease mutations9755
Blocks (Seattle)TBKBP1
SuperfamilyA7MCY6
Human Protein AtlasENSG00000198933
Peptide AtlasA7MCY6
HPRD12239
IPIIPI00006064   IPI00887117   IPI01012171   
Protein Interaction databases
DIP (DOE-UCLA)A7MCY6
IntAct (EBI)A7MCY6
FunCoupENSG00000198933
BioGRIDTBKBP1
STRING (EMBL)TBKBP1
ZODIACTBKBP1
Ontologies - Pathways
QuickGOA7MCY6
Ontology : AmiGOprotein binding  viral process  innate immune response  
Ontology : EGO-EBIprotein binding  viral process  innate immune response  
Pathways : KEGGRIG-I-like receptor signaling pathway   
NDEx NetworkTBKBP1
Atlas of Cancer Signalling NetworkTBKBP1
Wikipedia pathwaysTBKBP1
Orthology - Evolution
OrthoDB9755
GeneTree (enSembl)ENSG00000198933
Phylogenetic Trees/Animal Genes : TreeFamTBKBP1
HOVERGENA7MCY6
HOGENOMA7MCY6
Homologs : HomoloGeneTBKBP1
Homology/Alignments : Family Browser (UCSC)TBKBP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTBKBP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TBKBP1
dbVarTBKBP1
ClinVarTBKBP1
1000_GenomesTBKBP1 
Exome Variant ServerTBKBP1
ExAC (Exome Aggregation Consortium)TBKBP1 (select the gene name)
Genetic variants : HAPMAP9755
Genomic Variants (DGV)TBKBP1 [DGVbeta]
DECIPHERTBKBP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTBKBP1 
Mutations
ICGC Data PortalTBKBP1 
TCGA Data PortalTBKBP1 
Broad Tumor PortalTBKBP1
OASIS PortalTBKBP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTBKBP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTBKBP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TBKBP1
DgiDB (Drug Gene Interaction Database)TBKBP1
DoCM (Curated mutations)TBKBP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TBKBP1 (select a term)
intoGenTBKBP1
Cancer3DTBKBP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608476   
Orphanet
MedgenTBKBP1
Genetic Testing Registry TBKBP1
NextProtA7MCY6 [Medical]
TSGene9755
GENETestsTBKBP1
Target ValidationTBKBP1
Huge Navigator TBKBP1 [HugePedia]
snp3D : Map Gene to Disease9755
BioCentury BCIQTBKBP1
ClinGenTBKBP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9755
Chemical/Pharm GKB GenePA142670830
Clinical trialTBKBP1
Miscellaneous
canSAR (ICR)TBKBP1 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTBKBP1
EVEXTBKBP1
GoPubMedTBKBP1
iHOPTBKBP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:44:59 CEST 2017

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