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TBX5-AS1 (TBX5 antisense RNA 1)

Identity

Alias_namesTBX5 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) TBX5-AS1
LocusID (NCBI) 255480
Atlas_Id 74557
Location 12q24.21  [Link to chromosome band 12q24]
Location_base_pair Starts at 114408195 and ends at 114412832 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TBX5-AS1   27402
Cards
Entrez_Gene (NCBI)TBX5-AS1  255480  TBX5 antisense RNA 1
Aliases
GeneCards (Weizmann)TBX5-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr12:114408195-114412832 [Contig_View]  TBX5-AS1 [Vega]
TCGA cBioPortalTBX5-AS1
AceView (NCBI)TBX5-AS1
Genatlas (Paris)TBX5-AS1
WikiGenes255480
SOURCE (Princeton)TBX5-AS1
Genetics Home Reference (NIH)TBX5-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TBX5-AS1  -     chr12:114408195-114412832 +  12q24.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TBX5-AS1  -     12q24.21   [Description]    (hg19-Feb_2009)
EnsemblTBX5-AS1 - 12q24.21 [CytoView hg19]  TBX5-AS1 - 12q24.21 [CytoView hg38]
Mapping of homologs : NCBITBX5-AS1 [Mapview hg19]  TBX5-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091766 BM970213 CB992854 U47671
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TBX5-AS1
Cluster EST : UnigeneHs.567915 [ NCBI ]
CGAP (NCI)Hs.567915
Gene ExpressionTBX5-AS1 [ NCBI-GEO ]   TBX5-AS1 [ EBI - ARRAY_EXPRESS ]   TBX5-AS1 [ SEEK ]   TBX5-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TBX5-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)255480
GTEX Portal (Tissue expression)TBX5-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TBX5-AS1
DMDM Disease mutations255480
Blocks (Seattle)TBX5-AS1
IPIIPI00328355   
Protein Interaction databases
BioGRIDTBX5-AS1
STRING (EMBL)TBX5-AS1
ZODIACTBX5-AS1
Ontologies - Pathways
Huge Navigator TBX5-AS1 [HugePedia]
snp3D : Map Gene to Disease255480
BioCentury BCIQTBX5-AS1
ClinGenTBX5-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD255480
Chemical/Pharm GKB GenePA166094734
Clinical trialTBX5-AS1
Miscellaneous
canSAR (ICR)TBX5-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTBX5-AS1
EVEXTBX5-AS1
GoPubMedTBX5-AS1
iHOPTBX5-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:45:01 CEST 2017

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