TCAF1 (TRPM8 channel associated factor 1)

2015-03-01  

Identity

HGNC
TCAF1
LOCATION
7q35
LOCUSID
9747
ALIAS
FAM115A,GATD9A
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 9747
MIM: 616251
HGNC: 22201
Ensembl: ENSG00000198420

Variants:

dbSNP: 9747
ClinVar: 9747
TCGA: ENSG00000198420
COSMIC: TCAF1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000198420ENST00000355951Q9Y4C2
ENSG00000198420ENST00000460532C9JD13
ENSG00000198420ENST00000478172C9K0E7
ENSG00000198420ENST00000479870Q9Y4C2
ENSG00000198420ENST00000485416C9J648
ENSG00000198420ENST00000491908C9J9F4

Expression (GTEx)

0
5
10
15
20
25
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
255591862015TRP channel-associated factors are a novel protein family that regulates TRPM8 trafficking and activity.24
255591862015TRP channel-associated factors are a novel protein family that regulates TRPM8 trafficking and activity.24

Citation

Dessen P

TCAF1 (TRPM8 channel associated factor 1)

Atlas Genet Cytogenet Oncol Haematol. 2015-03-01

Online version: http://atlasgeneticsoncology.org/gene/55663/tcaf1