Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TCAF2P1 (TRPM8 channel associated factor 2 pseudogene 1)


Alias (NCBI)FAM115D
HGNC Alias symbFLJ40722-like
HGNC Previous nameFAM139B
HGNC Previous namefamily with sequence similarity 139, member B
 family with sequence similarity 115, member D (pseudogene)
 TRPM8 channel-associated factor 2 pseudogene 1
LocusID (NCBI) 653691
Atlas_Id 76700
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 143642254 and ends at 143647646 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)TCAF2P1   33603
Entrez_Gene (NCBI)TCAF2P1    TRPM8 channel associated factor 2 pseudogene 1
AliasesFAM115D; FAM139B; TCAF2BP
GeneCards (Weizmann)TCAF2P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr7:143642254-143647646 [Contig_View]  TCAF2P1 [Vega]
TCGA cBioPortalTCAF2P1
Genatlas (Paris)TCAF2P1
SOURCE (Princeton)TCAF2P1
Genetics Home Reference (NIH)TCAF2P1
Genomic and cartography
GoldenPath hg38 (UCSC)TCAF2P1  -     chr7:143642254-143647646 -  7q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TCAF2P1  -     7q35   [Description]    (hg19-Feb_2009)
GoldenPathTCAF2P1 - 7q35 [CytoView hg19]  TCAF2P1 - 7q35 [CytoView hg38]
Genome Data Viewer NCBITCAF2P1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BG748361 CB046449
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TCAF2P1
Gene ExpressionTCAF2P1 [ NCBI-GEO ]   TCAF2P1 [ EBI - ARRAY_EXPRESS ]   TCAF2P1 [ SEEK ]   TCAF2P1 [ MEM ]
Gene Expression Viewer (FireBrowse)TCAF2P1 [ Firebrowse - Broad ]
GenevisibleExpression of TCAF2P1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)653691
GTEX Portal (Tissue expression)TCAF2P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TCAF2P1
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:25:01 CEST 2021

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