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TCAIM (T-cell activation inhibitor, mitochondrial)

Identity

Alias_namesC3orf23
chromosome 3 open reading frame 23
T cell activation inhibitor, mitochondrial
Alias_symbol (synonym)DKFZp313N0621
TOAG-1
Other aliasTOAG1
HGNC (Hugo) TCAIM
LocusID (NCBI) 285343
Atlas_Id 74560
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 44338452 and ends at 44359802 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TCAIM   25241
Cards
Entrez_Gene (NCBI)TCAIM  285343  T-cell activation inhibitor, mitochondrial
AliasesC3orf23; TOAG-1; TOAG1
GeneCards (Weizmann)TCAIM
Ensembl hg19 (Hinxton)ENSG00000179152 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000179152 [Gene_View]  chr3:44338452-44359802 [Contig_View]  TCAIM [Vega]
ICGC DataPortalENSG00000179152
TCGA cBioPortalTCAIM
AceView (NCBI)TCAIM
Genatlas (Paris)TCAIM
WikiGenes285343
SOURCE (Princeton)TCAIM
Genetics Home Reference (NIH)TCAIM
Genomic and cartography
GoldenPath hg38 (UCSC)TCAIM  -     chr3:44338452-44359802 +  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TCAIM  -     3p21.31   [Description]    (hg19-Feb_2009)
EnsemblTCAIM - 3p21.31 [CytoView hg19]  TCAIM - 3p21.31 [CytoView hg38]
Mapping of homologs : NCBITCAIM [Mapview hg19]  TCAIM [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056593 AK123680 AK124087 AK292756 AL832473
RefSeq transcript (Entrez)NM_001029839 NM_001029840 NM_001282913 NM_001282914 NM_001282915 NM_173826
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TCAIM
Cluster EST : UnigeneHs.55131 [ NCBI ]
CGAP (NCI)Hs.55131
Alternative Splicing GalleryENSG00000179152
Gene ExpressionTCAIM [ NCBI-GEO ]   TCAIM [ EBI - ARRAY_EXPRESS ]   TCAIM [ SEEK ]   TCAIM [ MEM ]
Gene Expression Viewer (FireBrowse)TCAIM [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)285343
GTEX Portal (Tissue expression)TCAIM
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N3R3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N3R3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N3R3
Splice isoforms : SwissVarQ8N3R3
PhosPhoSitePlusQ8N3R3
Domains : Interpro (EBI)DUF4460    DUF4461    TCAIM   
Domain families : Pfam (Sanger)DUF4460 (PF14687)    DUF4461 (PF14688)   
Domain families : Pfam (NCBI)pfam14687    pfam14688   
Conserved Domain (NCBI)TCAIM
DMDM Disease mutations285343
Blocks (Seattle)TCAIM
SuperfamilyQ8N3R3
Human Protein AtlasENSG00000179152
Peptide AtlasQ8N3R3
HPRD13184
IPIIPI00166599   IPI00646601   IPI00430797   IPI00798259   
Protein Interaction databases
DIP (DOE-UCLA)Q8N3R3
IntAct (EBI)Q8N3R3
FunCoupENSG00000179152
BioGRIDTCAIM
STRING (EMBL)TCAIM
ZODIACTCAIM
Ontologies - Pathways
QuickGOQ8N3R3
Ontology : AmiGOmitochondrion  
Ontology : EGO-EBImitochondrion  
NDEx NetworkTCAIM
Atlas of Cancer Signalling NetworkTCAIM
Wikipedia pathwaysTCAIM
Orthology - Evolution
OrthoDB285343
GeneTree (enSembl)ENSG00000179152
Phylogenetic Trees/Animal Genes : TreeFamTCAIM
HOVERGENQ8N3R3
HOGENOMQ8N3R3
Homologs : HomoloGeneTCAIM
Homology/Alignments : Family Browser (UCSC)TCAIM
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTCAIM [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TCAIM
dbVarTCAIM
ClinVarTCAIM
1000_GenomesTCAIM 
Exome Variant ServerTCAIM
ExAC (Exome Aggregation Consortium)TCAIM (select the gene name)
Genetic variants : HAPMAP285343
Genomic Variants (DGV)TCAIM [DGVbeta]
DECIPHERTCAIM [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTCAIM 
Mutations
ICGC Data PortalTCAIM 
TCGA Data PortalTCAIM 
Broad Tumor PortalTCAIM
OASIS PortalTCAIM [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTCAIM
BioMutasearch TCAIM
DgiDB (Drug Gene Interaction Database)TCAIM
DoCM (Curated mutations)TCAIM (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TCAIM (select a term)
intoGenTCAIM
Cancer3DTCAIM(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTCAIM
Genetic Testing Registry TCAIM
NextProtQ8N3R3 [Medical]
TSGene285343
GENETestsTCAIM
Target ValidationTCAIM
Huge Navigator TCAIM [HugePedia]
snp3D : Map Gene to Disease285343
BioCentury BCIQTCAIM
ClinGenTCAIM
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285343
Chemical/Pharm GKB GenePA142672384
Clinical trialTCAIM
Miscellaneous
canSAR (ICR)TCAIM (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTCAIM
EVEXTCAIM
GoPubMedTCAIM
iHOPTCAIM
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:41:06 CEST 2017

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