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TCEAL2 (transcription elongation factor A like 2)

Identity

Alias (NCBI)MY0876G05
WEX1
my048
HGNC (Hugo) TCEAL2
HGNC Alias symbmy048
MY0876G05
WEX1
HGNC Previous nametranscription elongation factor A (SII)-like 2
LocusID (NCBI) 140597
Atlas_Id 74564
Location Xq22.1  [Link to chromosome band Xq22]
Location_base_pair Starts at 102125679 and ends at 102127712 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TCEAL2 (Xq22.1) / DLG2 (11q14.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TCEAL2   29818
Cards
Entrez_Gene (NCBI)TCEAL2    transcription elongation factor A like 2
AliasesMY0876G05; WEX1; my048
GeneCards (Weizmann)TCEAL2
Ensembl hg19 (Hinxton)ENSG00000184905 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184905 [Gene_View]  ENSG00000184905 [Sequence]  chrX:102125679-102127712 [Contig_View]  TCEAL2 [Vega]
ICGC DataPortalENSG00000184905
TCGA cBioPortalTCEAL2
AceView (NCBI)TCEAL2
Genatlas (Paris)TCEAL2
SOURCE (Princeton)TCEAL2
Genetics Home Reference (NIH)TCEAL2
Genomic and cartography
GoldenPath hg38 (UCSC)TCEAL2  -     chrX:102125679-102127712 +  Xq22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TCEAL2  -     Xq22.1   [Description]    (hg19-Feb_2009)
GoldenPathTCEAL2 - Xq22.1 [CytoView hg19]  TCEAL2 - Xq22.1 [CytoView hg38]
ImmunoBaseENSG00000184905
Genome Data Viewer NCBITCEAL2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF325115 AK312138 BC093932 BC104764 BM699243
RefSeq transcript (Entrez)NM_080390
Consensus coding sequences : CCDS (NCBI)TCEAL2
Gene ExpressionTCEAL2 [ NCBI-GEO ]   TCEAL2 [ EBI - ARRAY_EXPRESS ]   TCEAL2 [ SEEK ]   TCEAL2 [ MEM ]
Gene Expression Viewer (FireBrowse)TCEAL2 [ Firebrowse - Broad ]
GenevisibleExpression of TCEAL2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)140597
GTEX Portal (Tissue expression)TCEAL2
Human Protein AtlasENSG00000184905-TCEAL2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H3H9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H3H9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H3H9
PhosPhoSitePlusQ9H3H9
Domains : Interpro (EBI)TF_A-like/BEX   
Domain families : Pfam (Sanger)BEX (PF04538)   
Domain families : Pfam (NCBI)pfam04538   
Conserved Domain (NCBI)TCEAL2
SuperfamilyQ9H3H9
AlphaFold pdb e-kbQ9H3H9   
Human Protein Atlas [tissue]ENSG00000184905-TCEAL2 [tissue]
HPRD06761
Protein Interaction databases
DIP (DOE-UCLA)Q9H3H9
IntAct (EBI)Q9H3H9
BioGRIDTCEAL2
STRING (EMBL)TCEAL2
ZODIACTCEAL2
Ontologies - Pathways
QuickGOQ9H3H9
Ontology : AmiGOnucleus  WW domain binding  
Ontology : EGO-EBInucleus  WW domain binding  
NDEx NetworkTCEAL2
Atlas of Cancer Signalling NetworkTCEAL2
Wikipedia pathwaysTCEAL2
Orthology - Evolution
OrthoDB140597
GeneTree (enSembl)ENSG00000184905
Phylogenetic Trees/Animal Genes : TreeFamTCEAL2
Homologs : HomoloGeneTCEAL2
Homology/Alignments : Family Browser (UCSC)TCEAL2
Gene fusions - Rearrangements
Fusion : QuiverTCEAL2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTCEAL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TCEAL2
dbVarTCEAL2
ClinVarTCEAL2
MonarchTCEAL2
1000_GenomesTCEAL2 
Exome Variant ServerTCEAL2
GNOMAD BrowserENSG00000184905
Varsome BrowserTCEAL2
ACMGTCEAL2 variants
VarityQ9H3H9
Genomic Variants (DGV)TCEAL2 [DGVbeta]
DECIPHERTCEAL2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTCEAL2 
Mutations
ICGC Data PortalTCEAL2 
TCGA Data PortalTCEAL2 
Broad Tumor PortalTCEAL2
OASIS PortalTCEAL2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTCEAL2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTCEAL2
Mutations and Diseases : HGMDTCEAL2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTCEAL2
DgiDB (Drug Gene Interaction Database)TCEAL2
DoCM (Curated mutations)TCEAL2
CIViC (Clinical Interpretations of Variants in Cancer)TCEAL2
Cancer3DTCEAL2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTCEAL2
MedgenTCEAL2
Genetic Testing Registry TCEAL2
NextProtQ9H3H9 [Medical]
GENETestsTCEAL2
Target ValidationTCEAL2
Huge Navigator TCEAL2 [HugePedia]
ClinGenTCEAL2
Clinical trials, drugs, therapy
MyCancerGenomeTCEAL2
Protein Interactions : CTDTCEAL2
Pharm GKB GenePA134922072
PharosQ9H3H9
Clinical trialTCEAL2
Miscellaneous
canSAR (ICR)TCEAL2
HarmonizomeTCEAL2
DataMed IndexTCEAL2
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTCEAL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:02 CEST 2021

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