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TCEAL3 (transcription elongation factor A like 3)

Identity

Alias (NCBI)WEX8
HGNC (Hugo) TCEAL3
HGNC Alias symbMGC15737
WEX8
HGNC Previous nametranscription elongation factor A (SII)-like 3
LocusID (NCBI) 85012
Atlas_Id 74565
Location Xq22.2  [Link to chromosome band Xq22]
Location_base_pair Starts at 103607963 and ends at 103609927 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TCEAL3 (Xq22.2) / TMEM179B (11q12.3)TMEM179B (11q12.3) / TCEAL3 (Xq22.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TCEAL3   28247
Cards
Entrez_Gene (NCBI)TCEAL3    transcription elongation factor A like 3
AliasesWEX8
GeneCards (Weizmann)TCEAL3
Ensembl hg19 (Hinxton)ENSG00000196507 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196507 [Gene_View]  ENSG00000196507 [Sequence]  chrX:103607963-103609927 [Contig_View]  TCEAL3 [Vega]
ICGC DataPortalENSG00000196507
TCGA cBioPortalTCEAL3
AceView (NCBI)TCEAL3
Genatlas (Paris)TCEAL3
SOURCE (Princeton)TCEAL3
Genetics Home Reference (NIH)TCEAL3
Genomic and cartography
GoldenPath hg38 (UCSC)TCEAL3  -     chrX:103607963-103609927 +  Xq22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TCEAL3  -     Xq22.2   [Description]    (hg19-Feb_2009)
GoldenPathTCEAL3 - Xq22.2 [CytoView hg19]  TCEAL3 - Xq22.2 [CytoView hg38]
ImmunoBaseENSG00000196507
Genome Data Viewer NCBITCEAL3 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF163263 AK098494 BC007622 BC008703
RefSeq transcript (Entrez)NM_001006933 NM_032926
Consensus coding sequences : CCDS (NCBI)TCEAL3
Gene ExpressionTCEAL3 [ NCBI-GEO ]   TCEAL3 [ EBI - ARRAY_EXPRESS ]   TCEAL3 [ SEEK ]   TCEAL3 [ MEM ]
Gene Expression Viewer (FireBrowse)TCEAL3 [ Firebrowse - Broad ]
GenevisibleExpression of TCEAL3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85012
GTEX Portal (Tissue expression)TCEAL3
Human Protein AtlasENSG00000196507-TCEAL3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ969E4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ969E4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ969E4
PhosPhoSitePlusQ969E4
Domains : Interpro (EBI)TF_A-like/BEX   
Domain families : Pfam (Sanger)BEX (PF04538)   
Domain families : Pfam (NCBI)pfam04538   
Conserved Domain (NCBI)TCEAL3
SuperfamilyQ969E4
AlphaFold pdb e-kbQ969E4   
Human Protein Atlas [tissue]ENSG00000196507-TCEAL3 [tissue]
HPRD06636
Protein Interaction databases
DIP (DOE-UCLA)Q969E4
IntAct (EBI)Q969E4
BioGRIDTCEAL3
STRING (EMBL)TCEAL3
ZODIACTCEAL3
Ontologies - Pathways
QuickGOQ969E4
Ontology : AmiGOnucleus  WW domain binding  
Ontology : EGO-EBInucleus  WW domain binding  
NDEx NetworkTCEAL3
Atlas of Cancer Signalling NetworkTCEAL3
Wikipedia pathwaysTCEAL3
Orthology - Evolution
OrthoDB85012
GeneTree (enSembl)ENSG00000196507
Phylogenetic Trees/Animal Genes : TreeFamTCEAL3
Homologs : HomoloGeneTCEAL3
Homology/Alignments : Family Browser (UCSC)TCEAL3
Gene fusions - Rearrangements
Fusion : QuiverTCEAL3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTCEAL3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TCEAL3
dbVarTCEAL3
ClinVarTCEAL3
MonarchTCEAL3
1000_GenomesTCEAL3 
Exome Variant ServerTCEAL3
GNOMAD BrowserENSG00000196507
Varsome BrowserTCEAL3
ACMGTCEAL3 variants
VarityQ969E4
Genomic Variants (DGV)TCEAL3 [DGVbeta]
DECIPHERTCEAL3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTCEAL3 
Mutations
ICGC Data PortalTCEAL3 
TCGA Data PortalTCEAL3 
Broad Tumor PortalTCEAL3
OASIS PortalTCEAL3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTCEAL3  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTCEAL3
Mutations and Diseases : HGMDTCEAL3
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTCEAL3
DgiDB (Drug Gene Interaction Database)TCEAL3
DoCM (Curated mutations)TCEAL3
CIViC (Clinical Interpretations of Variants in Cancer)TCEAL3
Cancer3DTCEAL3
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTCEAL3
MedgenTCEAL3
Genetic Testing Registry TCEAL3
NextProtQ969E4 [Medical]
GENETestsTCEAL3
Target ValidationTCEAL3
Huge Navigator TCEAL3 [HugePedia]
ClinGenTCEAL3
Clinical trials, drugs, therapy
MyCancerGenomeTCEAL3
Protein Interactions : CTDTCEAL3
Pharm GKB GenePA128394737
PharosQ969E4
Clinical trialTCEAL3
Miscellaneous
canSAR (ICR)TCEAL3
HarmonizomeTCEAL3
DataMed IndexTCEAL3
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTCEAL3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:02 CEST 2021

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