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TCEAL5 (transcription elongation factor A like 5)

Identity

Alias (NCBI)WEX4
HGNC (Hugo) TCEAL5
HGNC Alias symbWEX4
HGNC Previous nametranscription elongation factor A (SII)-like 5
LocusID (NCBI) 340543
Atlas_Id 74566
Location Xq22.1  [Link to chromosome band Xq22]
Location_base_pair Starts at 103273691 and ends at 103276750 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TCEAL5   22282
Cards
Entrez_Gene (NCBI)TCEAL5    transcription elongation factor A like 5
AliasesWEX4
GeneCards (Weizmann)TCEAL5
Ensembl hg19 (Hinxton)ENSG00000204065 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204065 [Gene_View]  ENSG00000204065 [Sequence]  chrX:103273691-103276750 [Contig_View]  TCEAL5 [Vega]
ICGC DataPortalENSG00000204065
TCGA cBioPortalTCEAL5
AceView (NCBI)TCEAL5
Genatlas (Paris)TCEAL5
SOURCE (Princeton)TCEAL5
Genetics Home Reference (NIH)TCEAL5
Genomic and cartography
GoldenPath hg38 (UCSC)TCEAL5  -     chrX:103273691-103276750 -  Xq22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TCEAL5  -     Xq22.1   [Description]    (hg19-Feb_2009)
GoldenPathTCEAL5 - Xq22.1 [CytoView hg19]  TCEAL5 - Xq22.1 [CytoView hg38]
ImmunoBaseENSG00000204065
Genome Data Viewer NCBITCEAL5 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF086094 BC132922 BC132924 BM725918
RefSeq transcript (Entrez)NM_001012979
Consensus coding sequences : CCDS (NCBI)TCEAL5
Gene ExpressionTCEAL5 [ NCBI-GEO ]   TCEAL5 [ EBI - ARRAY_EXPRESS ]   TCEAL5 [ SEEK ]   TCEAL5 [ MEM ]
Gene Expression Viewer (FireBrowse)TCEAL5 [ Firebrowse - Broad ]
GenevisibleExpression of TCEAL5 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)340543
GTEX Portal (Tissue expression)TCEAL5
Human Protein AtlasENSG00000204065-TCEAL5 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5H9L2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5H9L2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5H9L2
PhosPhoSitePlusQ5H9L2
Domains : Interpro (EBI)TF_A-like/BEX   
Domain families : Pfam (Sanger)BEX (PF04538)   
Domain families : Pfam (NCBI)pfam04538   
Conserved Domain (NCBI)TCEAL5
SuperfamilyQ5H9L2
AlphaFold pdb e-kbQ5H9L2   
Human Protein Atlas [tissue]ENSG00000204065-TCEAL5 [tissue]
HPRD18502
Protein Interaction databases
DIP (DOE-UCLA)Q5H9L2
IntAct (EBI)Q5H9L2
BioGRIDTCEAL5
STRING (EMBL)TCEAL5
ZODIACTCEAL5
Ontologies - Pathways
QuickGOQ5H9L2
Ontology : AmiGOprotein binding  nucleus  WW domain binding  
Ontology : EGO-EBIprotein binding  nucleus  WW domain binding  
NDEx NetworkTCEAL5
Atlas of Cancer Signalling NetworkTCEAL5
Wikipedia pathwaysTCEAL5
Orthology - Evolution
OrthoDB340543
GeneTree (enSembl)ENSG00000204065
Phylogenetic Trees/Animal Genes : TreeFamTCEAL5
Homologs : HomoloGeneTCEAL5
Homology/Alignments : Family Browser (UCSC)TCEAL5
Gene fusions - Rearrangements
Fusion : QuiverTCEAL5
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTCEAL5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TCEAL5
dbVarTCEAL5
ClinVarTCEAL5
MonarchTCEAL5
1000_GenomesTCEAL5 
Exome Variant ServerTCEAL5
GNOMAD BrowserENSG00000204065
Varsome BrowserTCEAL5
ACMGTCEAL5 variants
VarityQ5H9L2
Genomic Variants (DGV)TCEAL5 [DGVbeta]
DECIPHERTCEAL5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTCEAL5 
Mutations
ICGC Data PortalTCEAL5 
TCGA Data PortalTCEAL5 
Broad Tumor PortalTCEAL5
OASIS PortalTCEAL5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTCEAL5  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTCEAL5
Mutations and Diseases : HGMDTCEAL5
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTCEAL5
DgiDB (Drug Gene Interaction Database)TCEAL5
DoCM (Curated mutations)TCEAL5
CIViC (Clinical Interpretations of Variants in Cancer)TCEAL5
Cancer3DTCEAL5
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTCEAL5
MedgenTCEAL5
Genetic Testing Registry TCEAL5
NextProtQ5H9L2 [Medical]
GENETestsTCEAL5
Target ValidationTCEAL5
Huge Navigator TCEAL5 [HugePedia]
ClinGenTCEAL5
Clinical trials, drugs, therapy
MyCancerGenomeTCEAL5
Protein Interactions : CTDTCEAL5
Pharm GKB GenePA134950668
PharosQ5H9L2
Clinical trialTCEAL5
Miscellaneous
canSAR (ICR)TCEAL5
HarmonizomeTCEAL5
DataMed IndexTCEAL5
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTCEAL5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:02 CEST 2021

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