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TCEAL7 (transcription elongation factor A like 7)

Identity

Alias (NCBI)WEX5
HGNC (Hugo) TCEAL7
HGNC Alias symbMGC23947
WEX5
HGNC Previous nametranscription elongation factor A (SII)-like 7
LocusID (NCBI) 56849
Atlas_Id 43600
Location Xq22.2  [Link to chromosome band Xq22]
Location_base_pair Starts at 103330239 and ends at 103332326 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TCEAL7   28336
Cards
Entrez_Gene (NCBI)TCEAL7    transcription elongation factor A like 7
AliasesWEX5
GeneCards (Weizmann)TCEAL7
Ensembl hg19 (Hinxton)ENSG00000182916 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182916 [Gene_View]  ENSG00000182916 [Sequence]  chrX:103330239-103332326 [Contig_View]  TCEAL7 [Vega]
ICGC DataPortalENSG00000182916
TCGA cBioPortalTCEAL7
AceView (NCBI)TCEAL7
Genatlas (Paris)TCEAL7
SOURCE (Princeton)TCEAL7
Genetics Home Reference (NIH)TCEAL7
Genomic and cartography
GoldenPath hg38 (UCSC)TCEAL7  -     chrX:103330239-103332326 +  Xq22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TCEAL7  -     Xq22.2   [Description]    (hg19-Feb_2009)
GoldenPathTCEAL7 - Xq22.2 [CytoView hg19]  TCEAL7 - Xq22.2 [CytoView hg38]
ImmunoBaseENSG00000182916
Genome Data Viewer NCBITCEAL7 [Mapview hg19]  
OMIM300771   
Gene and transcription
Genbank (Entrez)AI753521 AJ297363 AK094400 BC005988 BC016786
RefSeq transcript (Entrez)NM_001348258 NM_152278
Consensus coding sequences : CCDS (NCBI)TCEAL7
Gene ExpressionTCEAL7 [ NCBI-GEO ]   TCEAL7 [ EBI - ARRAY_EXPRESS ]   TCEAL7 [ SEEK ]   TCEAL7 [ MEM ]
Gene Expression Viewer (FireBrowse)TCEAL7 [ Firebrowse - Broad ]
GenevisibleExpression of TCEAL7 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56849
GTEX Portal (Tissue expression)TCEAL7
Human Protein AtlasENSG00000182916-TCEAL7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BRU2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BRU2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BRU2
PhosPhoSitePlusQ9BRU2
Domains : Interpro (EBI)TF_A-like/BEX   
Domain families : Pfam (Sanger)BEX (PF04538)   
Domain families : Pfam (NCBI)pfam04538   
Conserved Domain (NCBI)TCEAL7
SuperfamilyQ9BRU2
AlphaFold pdb e-kbQ9BRU2   
Human Protein Atlas [tissue]ENSG00000182916-TCEAL7 [tissue]
HPRD06641
Protein Interaction databases
DIP (DOE-UCLA)Q9BRU2
IntAct (EBI)Q9BRU2
BioGRIDTCEAL7
STRING (EMBL)TCEAL7
ZODIACTCEAL7
Ontologies - Pathways
QuickGOQ9BRU2
Ontology : AmiGOnucleus  nucleus  nucleoplasm  negative regulation of NF-kappaB transcription factor activity  negative regulation of transcription, DNA-templated  WW domain binding  
Ontology : EGO-EBInucleus  nucleus  nucleoplasm  negative regulation of NF-kappaB transcription factor activity  negative regulation of transcription, DNA-templated  WW domain binding  
NDEx NetworkTCEAL7
Atlas of Cancer Signalling NetworkTCEAL7
Wikipedia pathwaysTCEAL7
Orthology - Evolution
OrthoDB56849
GeneTree (enSembl)ENSG00000182916
Phylogenetic Trees/Animal Genes : TreeFamTCEAL7
Homologs : HomoloGeneTCEAL7
Homology/Alignments : Family Browser (UCSC)TCEAL7
Gene fusions - Rearrangements
Fusion : QuiverTCEAL7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTCEAL7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TCEAL7
dbVarTCEAL7
ClinVarTCEAL7
MonarchTCEAL7
1000_GenomesTCEAL7 
Exome Variant ServerTCEAL7
GNOMAD BrowserENSG00000182916
Varsome BrowserTCEAL7
ACMGTCEAL7 variants
VarityQ9BRU2
Genomic Variants (DGV)TCEAL7 [DGVbeta]
DECIPHERTCEAL7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTCEAL7 
Mutations
ICGC Data PortalTCEAL7 
TCGA Data PortalTCEAL7 
Broad Tumor PortalTCEAL7
OASIS PortalTCEAL7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTCEAL7  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTCEAL7
Mutations and Diseases : HGMDTCEAL7
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTCEAL7
DgiDB (Drug Gene Interaction Database)TCEAL7
DoCM (Curated mutations)TCEAL7
CIViC (Clinical Interpretations of Variants in Cancer)TCEAL7
Cancer3DTCEAL7
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300771   
Orphanet
DisGeNETTCEAL7
MedgenTCEAL7
Genetic Testing Registry TCEAL7
NextProtQ9BRU2 [Medical]
GENETestsTCEAL7
Target ValidationTCEAL7
Huge Navigator TCEAL7 [HugePedia]
ClinGenTCEAL7
Clinical trials, drugs, therapy
MyCancerGenomeTCEAL7
Protein Interactions : CTDTCEAL7
Pharm GKB GenePA134936264
PharosQ9BRU2
Clinical trialTCEAL7
Miscellaneous
canSAR (ICR)TCEAL7
HarmonizomeTCEAL7
DataMed IndexTCEAL7
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTCEAL7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:34:33 CEST 2021

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