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TCEAL7 (transcription elongation factor A like 7)

Identity

Alias_namestranscription elongation factor A (SII)-like 7
Alias_symbol (synonym)MGC23947
WEX5
Other alias
HGNC (Hugo) TCEAL7
LocusID (NCBI) 56849
Atlas_Id 43600
Location Xq22.2  [Link to chromosome band Xq22]
Location_base_pair Starts at 103330186 and ends at 103332326 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TCEAL7   28336
Cards
Entrez_Gene (NCBI)TCEAL7  56849  transcription elongation factor A like 7
AliasesWEX5
GeneCards (Weizmann)TCEAL7
Ensembl hg19 (Hinxton)ENSG00000182916 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182916 [Gene_View]  chrX:103330186-103332326 [Contig_View]  TCEAL7 [Vega]
ICGC DataPortalENSG00000182916
TCGA cBioPortalTCEAL7
AceView (NCBI)TCEAL7
Genatlas (Paris)TCEAL7
WikiGenes56849
SOURCE (Princeton)TCEAL7
Genetics Home Reference (NIH)TCEAL7
Genomic and cartography
GoldenPath hg38 (UCSC)TCEAL7  -     chrX:103330186-103332326 +  Xq22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TCEAL7  -     Xq22.2   [Description]    (hg19-Feb_2009)
EnsemblTCEAL7 - Xq22.2 [CytoView hg19]  TCEAL7 - Xq22.2 [CytoView hg38]
Mapping of homologs : NCBITCEAL7 [Mapview hg19]  TCEAL7 [Mapview hg38]
OMIM300771   
Gene and transcription
Genbank (Entrez)AI753521 AJ297363 AK094400 BC005988 BC016786
RefSeq transcript (Entrez)NM_001348258 NM_152278
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TCEAL7
Cluster EST : UnigeneHs.21861 [ NCBI ]
CGAP (NCI)Hs.21861
Alternative Splicing GalleryENSG00000182916
Gene ExpressionTCEAL7 [ NCBI-GEO ]   TCEAL7 [ EBI - ARRAY_EXPRESS ]   TCEAL7 [ SEEK ]   TCEAL7 [ MEM ]
Gene Expression Viewer (FireBrowse)TCEAL7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56849
GTEX Portal (Tissue expression)TCEAL7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BRU2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BRU2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BRU2
Splice isoforms : SwissVarQ9BRU2
PhosPhoSitePlusQ9BRU2
Domains : Interpro (EBI)TF_A-like/BEX   
Domain families : Pfam (Sanger)BEX (PF04538)   
Domain families : Pfam (NCBI)pfam04538   
Conserved Domain (NCBI)TCEAL7
DMDM Disease mutations56849
Blocks (Seattle)TCEAL7
SuperfamilyQ9BRU2
Human Protein AtlasENSG00000182916
Peptide AtlasQ9BRU2
HPRD06641
IPIIPI00059712   IPI00015197   
Protein Interaction databases
DIP (DOE-UCLA)Q9BRU2
IntAct (EBI)Q9BRU2
FunCoupENSG00000182916
BioGRIDTCEAL7
STRING (EMBL)TCEAL7
ZODIACTCEAL7
Ontologies - Pathways
QuickGOQ9BRU2
Ontology : AmiGOnucleus  transcription, DNA-templated  negative regulation of NF-kappaB transcription factor activity  negative regulation of transcription, DNA-templated  
Ontology : EGO-EBInucleus  transcription, DNA-templated  negative regulation of NF-kappaB transcription factor activity  negative regulation of transcription, DNA-templated  
NDEx NetworkTCEAL7
Atlas of Cancer Signalling NetworkTCEAL7
Wikipedia pathwaysTCEAL7
Orthology - Evolution
OrthoDB56849
GeneTree (enSembl)ENSG00000182916
Phylogenetic Trees/Animal Genes : TreeFamTCEAL7
HOVERGENQ9BRU2
HOGENOMQ9BRU2
Homologs : HomoloGeneTCEAL7
Homology/Alignments : Family Browser (UCSC)TCEAL7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTCEAL7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TCEAL7
dbVarTCEAL7
ClinVarTCEAL7
1000_GenomesTCEAL7 
Exome Variant ServerTCEAL7
ExAC (Exome Aggregation Consortium)TCEAL7 (select the gene name)
Genetic variants : HAPMAP56849
Genomic Variants (DGV)TCEAL7 [DGVbeta]
DECIPHERTCEAL7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTCEAL7 
Mutations
ICGC Data PortalTCEAL7 
TCGA Data PortalTCEAL7 
Broad Tumor PortalTCEAL7
OASIS PortalTCEAL7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTCEAL7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTCEAL7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TCEAL7
DgiDB (Drug Gene Interaction Database)TCEAL7
DoCM (Curated mutations)TCEAL7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TCEAL7 (select a term)
intoGenTCEAL7
Cancer3DTCEAL7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300771   
Orphanet
MedgenTCEAL7
Genetic Testing Registry TCEAL7
NextProtQ9BRU2 [Medical]
TSGene56849
GENETestsTCEAL7
Target ValidationTCEAL7
Huge Navigator TCEAL7 [HugePedia]
snp3D : Map Gene to Disease56849
BioCentury BCIQTCEAL7
ClinGenTCEAL7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56849
Chemical/Pharm GKB GenePA134936264
Clinical trialTCEAL7
Miscellaneous
canSAR (ICR)TCEAL7 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTCEAL7
EVEXTCEAL7
GoPubMedTCEAL7
iHOPTCEAL7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:16:34 CEST 2017

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