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TCEAL9 (transcription elongation factor A like 9)

Identity

Alias (NCBI)WBP5
WEX6
HGNC (Hugo) TCEAL9
HGNC Alias symbDKFZp313K1940
WEX6
HGNC Alias namepp21 homolog
HGNC Previous nameWBP5
HGNC Previous nameWW domain binding protein 5
LocusID (NCBI) 51186
Atlas_Id 78219
Location Xq22.2  [Link to chromosome band Xq22]
Location_base_pair Starts at 103356506 and ends at 103358462 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TCEAL9   30084
Cards
Entrez_Gene (NCBI)TCEAL9    transcription elongation factor A like 9
AliasesWBP5; WEX6
GeneCards (Weizmann)TCEAL9
Ensembl hg19 (Hinxton)ENSG00000185222 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185222 [Gene_View]  ENSG00000185222 [Sequence]  chrX:103356506-103358462 [Contig_View]  TCEAL9 [Vega]
ICGC DataPortalENSG00000185222
TCGA cBioPortalTCEAL9
AceView (NCBI)TCEAL9
Genatlas (Paris)TCEAL9
SOURCE (Princeton)TCEAL9
Genetics Home Reference (NIH)TCEAL9
Genomic and cartography
GoldenPath hg38 (UCSC)TCEAL9  -     chrX:103356506-103358462 +  Xq22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TCEAL9  -     Xq22.2   [Description]    (hg19-Feb_2009)
GoldenPathTCEAL9 - Xq22.2 [CytoView hg19]  TCEAL9 - Xq22.2 [CytoView hg38]
ImmunoBaseENSG00000185222
Genome Data Viewer NCBITCEAL9 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF125535 AK312190 AL833152 BC023544 BG400091
RefSeq transcript (Entrez)NM_001006612 NM_001006613 NM_001006614 NM_016303
Consensus coding sequences : CCDS (NCBI)TCEAL9
Gene ExpressionTCEAL9 [ NCBI-GEO ]   TCEAL9 [ EBI - ARRAY_EXPRESS ]   TCEAL9 [ SEEK ]   TCEAL9 [ MEM ]
Gene Expression Viewer (FireBrowse)TCEAL9 [ Firebrowse - Broad ]
GenevisibleExpression of TCEAL9 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51186
GTEX Portal (Tissue expression)TCEAL9
Human Protein AtlasENSG00000185222-TCEAL9 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UHQ7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UHQ7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UHQ7
PhosPhoSitePlusQ9UHQ7
Domains : Interpro (EBI)TF_A-like/BEX   
Domain families : Pfam (Sanger)BEX (PF04538)   
Domain families : Pfam (NCBI)pfam04538   
Conserved Domain (NCBI)TCEAL9
SuperfamilyQ9UHQ7
AlphaFold pdb e-kbQ9UHQ7   
Human Protein Atlas [tissue]ENSG00000185222-TCEAL9 [tissue]
HPRD06621
Protein Interaction databases
DIP (DOE-UCLA)Q9UHQ7
IntAct (EBI)Q9UHQ7
BioGRIDTCEAL9
STRING (EMBL)TCEAL9
ZODIACTCEAL9
Ontologies - Pathways
QuickGOQ9UHQ7
Ontology : AmiGOnucleus  WW domain binding  
Ontology : EGO-EBInucleus  WW domain binding  
NDEx NetworkTCEAL9
Atlas of Cancer Signalling NetworkTCEAL9
Wikipedia pathwaysTCEAL9
Orthology - Evolution
OrthoDB51186
GeneTree (enSembl)ENSG00000185222
Phylogenetic Trees/Animal Genes : TreeFamTCEAL9
Homologs : HomoloGeneTCEAL9
Homology/Alignments : Family Browser (UCSC)TCEAL9
Gene fusions - Rearrangements
Fusion : QuiverTCEAL9
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTCEAL9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TCEAL9
dbVarTCEAL9
ClinVarTCEAL9
MonarchTCEAL9
1000_GenomesTCEAL9 
Exome Variant ServerTCEAL9
GNOMAD BrowserENSG00000185222
Varsome BrowserTCEAL9
ACMGTCEAL9 variants
VarityQ9UHQ7
Genomic Variants (DGV)TCEAL9 [DGVbeta]
DECIPHERTCEAL9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTCEAL9 
Mutations
ICGC Data PortalTCEAL9 
TCGA Data PortalTCEAL9 
Broad Tumor PortalTCEAL9
OASIS PortalTCEAL9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTCEAL9  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTCEAL9
Mutations and Diseases : HGMDTCEAL9
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTCEAL9
DgiDB (Drug Gene Interaction Database)TCEAL9
DoCM (Curated mutations)TCEAL9
CIViC (Clinical Interpretations of Variants in Cancer)TCEAL9
Cancer3DTCEAL9
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTCEAL9
MedgenTCEAL9
Genetic Testing Registry TCEAL9
NextProtQ9UHQ7 [Medical]
GENETestsTCEAL9
Target ValidationTCEAL9
Huge Navigator TCEAL9 [HugePedia]
ClinGenTCEAL9
Clinical trials, drugs, therapy
MyCancerGenomeTCEAL9
Protein Interactions : CTDTCEAL9
Pharm GKB GenePA134921975
PharosQ9UHQ7
Clinical trialTCEAL9
Miscellaneous
canSAR (ICR)TCEAL9
HarmonizomeTCEAL9
DataMed IndexTCEAL9
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTCEAL9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:03 CEST 2021

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