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TCF19 (transcription factor 19)

Identity

Alias (NCBI)SC1
TCF-19
HGNC (Hugo) TCF19
HGNC Alias symbSC1
LocusID (NCBI) 6941
Atlas_Id 56299
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 31158589 and ends at 31164215 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TCF19   11629
Cards
Entrez_Gene (NCBI)TCF19    transcription factor 19
AliasesSC1; TCF-19
GeneCards (Weizmann)TCF19
Ensembl hg19 (Hinxton)ENSG00000137310 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000137310 [Gene_View]  ENSG00000137310 [Sequence]  chr6:31158589-31164215 [Contig_View]  TCF19 [Vega]
ICGC DataPortalENSG00000137310
TCGA cBioPortalTCF19
AceView (NCBI)TCF19
Genatlas (Paris)TCF19
SOURCE (Princeton)TCF19
Genetics Home Reference (NIH)TCF19
Genomic and cartography
GoldenPath hg38 (UCSC)TCF19  -     chr6:31158589-31164215 +  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TCF19  -     6p21.33   [Description]    (hg19-Feb_2009)
GoldenPathTCF19 - 6p21.33 [CytoView hg19]  TCF19 - 6p21.33 [CytoView hg38]
ImmunoBaseENSG00000137310
genome Data Viewer NCBITCF19 [Mapview hg19]  
OMIM600912   
Gene and transcription
Genbank (Entrez)AK056834 AK315258 BC002493 BC033086 BC044632
RefSeq transcript (Entrez)NM_001077511 NM_001318908 NM_007109
RefSeq genomic (Entrez)NC_000006 NT_113891 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)TCF19
Alternative Splicing GalleryENSG00000137310
Gene ExpressionTCF19 [ NCBI-GEO ]   TCF19 [ EBI - ARRAY_EXPRESS ]   TCF19 [ SEEK ]   TCF19 [ MEM ]
Gene Expression Viewer (FireBrowse)TCF19 [ Firebrowse - Broad ]
GenevisibleExpression of TCF19 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6941
GTEX Portal (Tissue expression)TCF19
Human Protein AtlasENSG00000137310-TCF19 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TCF19
Blocks (Seattle)TCF19
Human Protein Atlas [tissue]ENSG00000137310-TCF19 [tissue]
HPRD15986
IPIIPI00873279   IPI00827895   IPI01013818   
Protein Interaction databases
BioGRIDTCF19
STRING (EMBL)TCF19
ZODIACTCF19
Ontologies - Pathways
Litterature
PubMed36 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTCF19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:49:04 CET 2021

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