Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TCF19 (transcription factor 19)


Alias (NCBI)SC1
HGNC (Hugo) TCF19
HGNC Alias symbSC1
LocusID (NCBI) 6941
Atlas_Id 56299
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 31158589 and ends at 31164215 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)TCF19   11629
Entrez_Gene (NCBI)TCF19    transcription factor 19
AliasesSC1; TCF-19
GeneCards (Weizmann)TCF19
Ensembl hg19 (Hinxton)ENSG00000137310 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000137310 [Gene_View]  ENSG00000137310 [Sequence]  chr6:31158589-31164215 [Contig_View]  TCF19 [Vega]
ICGC DataPortalENSG00000137310
TCGA cBioPortalTCF19
AceView (NCBI)TCF19
Genatlas (Paris)TCF19
SOURCE (Princeton)TCF19
Genetics Home Reference (NIH)TCF19
Genomic and cartography
GoldenPath hg38 (UCSC)TCF19  -     chr6:31158589-31164215 +  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TCF19  -     6p21.33   [Description]    (hg19-Feb_2009)
GoldenPathTCF19 - 6p21.33 [CytoView hg19]  TCF19 - 6p21.33 [CytoView hg38]
genome Data Viewer NCBITCF19 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK056834 AK315258 BC002493 BC033086 BC044632
RefSeq transcript (Entrez)NM_001077511 NM_001318908 NM_007109
RefSeq genomic (Entrez)NC_000006 NT_113891 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)TCF19
Alternative Splicing GalleryENSG00000137310
Gene ExpressionTCF19 [ NCBI-GEO ]   TCF19 [ EBI - ARRAY_EXPRESS ]   TCF19 [ SEEK ]   TCF19 [ MEM ]
Gene Expression Viewer (FireBrowse)TCF19 [ Firebrowse - Broad ]
GenevisibleExpression of TCF19 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6941
GTEX Portal (Tissue expression)TCF19
Human Protein AtlasENSG00000137310-TCF19 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TCF19
Blocks (Seattle)TCF19
Human Protein Atlas [tissue]ENSG00000137310-TCF19 [tissue]
IPIIPI00873279   IPI00827895   IPI01013818   
Protein Interaction databases
Ontologies - Pathways
PubMed36 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 25 19:49:04 CET 2021

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