TCF25 (transcription factor 25)

2007-02-01  

Identity

HGNC
TCF25
LOCATION
16q24.3
LOCUSID
22980
ALIAS
FKSG26,Hulp1,NULP1,PRO2620,hKIAA1049
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 22980
MIM: 612326
HGNC: 29181
Ensembl: ENSG00000141002

Variants:

dbSNP: 22980
ClinVar: 22980
TCGA: ENSG00000141002
COSMIC: TCF25

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000141002ENST00000263346Q9BQ70
ENSG00000141002ENST00000263347Q9H384
ENSG00000141002ENST00000561958H3BSP8
ENSG00000141002ENST00000562193H3BRP4
ENSG00000141002ENST00000562256H3BQ53
ENSG00000141002ENST00000564652H3BR53
ENSG00000141002ENST00000565196H3BMJ8
ENSG00000141002ENST00000565404H3BS87
ENSG00000141002ENST00000566283H3BPU1
ENSG00000141002ENST00000568409H3BSS3
ENSG00000141002ENST00000568412H3BTU3
ENSG00000141002ENST00000614813Q9H7D3
ENSG00000141002ENST00000640279Q9BQ70

Expression (GTEx)

0
10
20
30
40
50
60
70
80
90
100
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
201983152010Association of genetic variants with hemorrhagic stroke in Japanese individuals.11
251847022014Epigenome-wide DNA methylation in hearing ability: new mechanisms for an old problem.6
165740692006hnulp1, a basic helix-loop-helix protein with a novel transcriptional repressive domain, inhibits transcriptional activity of serum response factor.4
180681142008Nuclear localized protein-1 (Nulp1) increases cell death of human osteosarcoma cells and binds the X-linked inhibitor of apoptosis protein.4
198512962010Assessment of a polymorphism of SDK1 with hypertension in Japanese Individuals.3

Citation

Dessen P

TCF25 (transcription factor 25)

Atlas Genet Cytogenet Oncol Haematol. 2007-02-01

Online version: http://atlasgeneticsoncology.org/gene/50020/tcf25