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TCP10 (t-complex 10)

Identity

Alias_namest-complex 10 (a murine tcp homolog)
t-complex 10 (mouse)
t-complex 10 homolog (mouse)
Other aliasTCP10A
HGNC (Hugo) TCP10
LocusID (NCBI) 6953
Atlas_Id 74587
Location 6q27  [Link to chromosome band 6q27]
Location_base_pair Starts at 167373089 and ends at 167384510 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TCP10   11656
Cards
Entrez_Gene (NCBI)TCP10  6953  t-complex 10
AliasesTCP10A
GeneCards (Weizmann)TCP10
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:167373089-167384510 [Contig_View]  TCP10 [Vega]
TCGA cBioPortalTCP10
AceView (NCBI)TCP10
Genatlas (Paris)TCP10
WikiGenes6953
SOURCE (Princeton)TCP10
Genetics Home Reference (NIH)TCP10
Genomic and cartography
GoldenPath hg38 (UCSC)TCP10  -     chr6:167373089-167384510 -  6q27   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TCP10  -     6q27   [Description]    (hg19-Feb_2009)
EnsemblTCP10 - 6q27 [CytoView hg19]  TCP10 - 6q27 [CytoView hg38]
Mapping of homologs : NCBITCP10 [Mapview hg19]  TCP10 [Mapview hg38]
OMIM187020   
Gene and transcription
Genbank (Entrez)AA994391 BC063451 BC065839 BC068592 DB446953
RefSeq transcript (Entrez)NM_004610
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TCP10
Cluster EST : UnigeneHs.351 [ NCBI ]
CGAP (NCI)Hs.351
Gene ExpressionTCP10 [ NCBI-GEO ]   TCP10 [ EBI - ARRAY_EXPRESS ]   TCP10 [ SEEK ]   TCP10 [ MEM ]
Gene Expression Viewer (FireBrowse)TCP10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6953
GTEX Portal (Tissue expression)TCP10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ12799   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ12799  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ12799
Splice isoforms : SwissVarQ12799
PhosPhoSitePlusQ12799
Domains : Interpro (EBI)TCP10_fam   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TCP10
DMDM Disease mutations6953
Blocks (Seattle)TCP10
SuperfamilyQ12799
Peptide AtlasQ12799
HPRD01752
IPIIPI00938122   IPI00955047   IPI00005747   IPI00964010   IPI00964307   IPI00966741   
Protein Interaction databases
DIP (DOE-UCLA)Q12799
IntAct (EBI)Q12799
BioGRIDTCP10
STRING (EMBL)TCP10
ZODIACTCP10
Ontologies - Pathways
QuickGOQ12799
Ontology : AmiGOcytosol  
Ontology : EGO-EBIcytosol  
NDEx NetworkTCP10
Atlas of Cancer Signalling NetworkTCP10
Wikipedia pathwaysTCP10
Orthology - Evolution
OrthoDB6953
Phylogenetic Trees/Animal Genes : TreeFamTCP10
HOVERGENQ12799
HOGENOMQ12799
Homologs : HomoloGeneTCP10
Homology/Alignments : Family Browser (UCSC)TCP10
Gene fusions - Rearrangements
Fusion : QuiverTCP10
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTCP10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TCP10
dbVarTCP10
ClinVarTCP10
1000_GenomesTCP10 
Exome Variant ServerTCP10
Varsome BrowserTCP10
Genetic variants : HAPMAP6953
Genomic Variants (DGV)TCP10 [DGVbeta]
DECIPHERTCP10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTCP10 
Mutations
ICGC Data PortalTCP10 
TCGA Data PortalTCP10 
Broad Tumor PortalTCP10
OASIS PortalTCP10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTCP10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTCP10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TCP10
DgiDB (Drug Gene Interaction Database)TCP10
DoCM (Curated mutations)TCP10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TCP10 (select a term)
intoGenTCP10
Cancer3DTCP10(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM187020   
Orphanet
DisGeNETTCP10
MedgenTCP10
Genetic Testing Registry TCP10
NextProtQ12799 [Medical]
TSGene6953
GENETestsTCP10
Target ValidationTCP10
Huge Navigator TCP10 [HugePedia]
snp3D : Map Gene to Disease6953
BioCentury BCIQTCP10
ClinGenTCP10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6953
Chemical/Pharm GKB GenePA36407
Clinical trialTCP10
Miscellaneous
canSAR (ICR)TCP10 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTCP10
EVEXTCP10
GoPubMedTCP10
iHOPTCP10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:34:22 CEST 2018

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