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TCP10L (t-complex 10 like)

Identity

Alias_namest-complex 10 (a murine tcp homolog)-like
t-complex 10 (mouse)-like
Alias_symbol (synonym)PRED77
Other aliasC21orf77
TCP10A-2
HGNC (Hugo) TCP10L
LocusID (NCBI) 140290
Atlas_Id 53963
Location 21q22.11  [Link to chromosome band 21q22]
Location_base_pair Starts at 32574841 and ends at 32585545 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TCP10L   11657
Cards
Entrez_Gene (NCBI)TCP10L  140290  t-complex 10 like
AliasesC21orf77; PRED77; TCP10A-2
GeneCards (Weizmann)TCP10L
Ensembl hg19 (Hinxton)ENSG00000242220 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000242220 [Gene_View]  chr21:32574841-32585545 [Contig_View]  TCP10L [Vega]
ICGC DataPortalENSG00000242220
TCGA cBioPortalTCP10L
AceView (NCBI)TCP10L
Genatlas (Paris)TCP10L
WikiGenes140290
SOURCE (Princeton)TCP10L
Genetics Home Reference (NIH)TCP10L
Genomic and cartography
GoldenPath hg38 (UCSC)TCP10L  -     chr21:32574841-32585545 -  21q22.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TCP10L  -     21q22.11   [Description]    (hg19-Feb_2009)
EnsemblTCP10L - 21q22.11 [CytoView hg19]  TCP10L - 21q22.11 [CytoView hg38]
Mapping of homologs : NCBITCP10L [Mapview hg19]  TCP10L [Mapview hg38]
OMIM608365   
Gene and transcription
Genbank (Entrez)AF115967 AK001794 AK058078 AK223529 BC022024
RefSeq transcript (Entrez)NM_018277 NM_144659
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TCP10L
Cluster EST : UnigeneHs.728804 [ NCBI ]
CGAP (NCI)Hs.728804
Alternative Splicing GalleryENSG00000242220
Gene ExpressionTCP10L [ NCBI-GEO ]   TCP10L [ EBI - ARRAY_EXPRESS ]   TCP10L [ SEEK ]   TCP10L [ MEM ]
Gene Expression Viewer (FireBrowse)TCP10L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)140290
GTEX Portal (Tissue expression)TCP10L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TDR4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TDR4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TDR4
Splice isoforms : SwissVarQ8TDR4
PhosPhoSitePlusQ8TDR4
Domains : Interpro (EBI)TCP10_fam   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TCP10L
DMDM Disease mutations140290
Blocks (Seattle)TCP10L
SuperfamilyQ8TDR4
Human Protein AtlasENSG00000242220
Peptide AtlasQ8TDR4
HPRD10518
IPIIPI00152587   
Protein Interaction databases
DIP (DOE-UCLA)Q8TDR4
IntAct (EBI)Q8TDR4
FunCoupENSG00000242220
BioGRIDTCP10L
STRING (EMBL)TCP10L
ZODIACTCP10L
Ontologies - Pathways
QuickGOQ8TDR4
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  RNA polymerase II transcription corepressor activity  protein binding  nucleus  transcription, DNA-templated  identical protein binding  protein self-association  repressing transcription factor binding  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  RNA polymerase II transcription corepressor activity  protein binding  nucleus  transcription, DNA-templated  identical protein binding  protein self-association  repressing transcription factor binding  
NDEx NetworkTCP10L
Atlas of Cancer Signalling NetworkTCP10L
Wikipedia pathwaysTCP10L
Orthology - Evolution
OrthoDB140290
GeneTree (enSembl)ENSG00000242220
Phylogenetic Trees/Animal Genes : TreeFamTCP10L
HOVERGENQ8TDR4
HOGENOMQ8TDR4
Homologs : HomoloGeneTCP10L
Homology/Alignments : Family Browser (UCSC)TCP10L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTCP10L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TCP10L
dbVarTCP10L
ClinVarTCP10L
1000_GenomesTCP10L 
Exome Variant ServerTCP10L
ExAC (Exome Aggregation Consortium)TCP10L (select the gene name)
Genetic variants : HAPMAP140290
Genomic Variants (DGV)TCP10L [DGVbeta]
DECIPHERTCP10L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTCP10L 
Mutations
ICGC Data PortalTCP10L 
TCGA Data PortalTCP10L 
Broad Tumor PortalTCP10L
OASIS PortalTCP10L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTCP10L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTCP10L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TCP10L
DgiDB (Drug Gene Interaction Database)TCP10L
DoCM (Curated mutations)TCP10L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TCP10L (select a term)
intoGenTCP10L
Cancer3DTCP10L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608365   
Orphanet
MedgenTCP10L
Genetic Testing Registry TCP10L
NextProtQ8TDR4 [Medical]
TSGene140290
GENETestsTCP10L
Target ValidationTCP10L
Huge Navigator TCP10L [HugePedia]
snp3D : Map Gene to Disease140290
BioCentury BCIQTCP10L
ClinGenTCP10L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD140290
Chemical/Pharm GKB GenePA36408
Clinical trialTCP10L
Miscellaneous
canSAR (ICR)TCP10L (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTCP10L
EVEXTCP10L
GoPubMedTCP10L
iHOPTCP10L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:34:35 CEST 2017

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