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TCP11X2 (t-complex 11 family, X-linked 2)

Identity

Alias (NCBI)-
HGNC (Hugo) TCP11X2
LocusID (NCBI) 100996648
Atlas_Id 74590
Location Xq22.1  [Link to chromosome band Xq22]
Location_base_pair Starts at 102215301 and ends at 102226791 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TCP11X2   48335
Cards
Entrez_Gene (NCBI)TCP11X2    t-complex 11 family, X-linked 2
Aliases
GeneCards (Weizmann)TCP11X2
Ensembl hg19 (Hinxton)ENSG00000215029 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000215029 [Gene_View]  ENSG00000215029 [Sequence]  chrX:102215301-102226791 [Contig_View]  TCP11X2 [Vega]
ICGC DataPortalENSG00000215029
TCGA cBioPortalTCP11X2
AceView (NCBI)TCP11X2
Genatlas (Paris)TCP11X2
SOURCE (Princeton)TCP11X2
Genetics Home Reference (NIH)TCP11X2
Genomic and cartography
GoldenPath hg38 (UCSC)TCP11X2  -     chrX:102215301-102226791 +  Xq22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TCP11X2  -     Xq22.1   [Description]    (hg19-Feb_2009)
GoldenPathTCP11X2 - Xq22.1 [CytoView hg19]  TCP11X2 - Xq22.1 [CytoView hg38]
ImmunoBaseENSG00000215029
Genome Data Viewer NCBITCP11X2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK093310 AK307893
RefSeq transcript (Entrez)NM_001277423
Consensus coding sequences : CCDS (NCBI)TCP11X2
Gene ExpressionTCP11X2 [ NCBI-GEO ]   TCP11X2 [ EBI - ARRAY_EXPRESS ]   TCP11X2 [ SEEK ]   TCP11X2 [ MEM ]
Gene Expression Viewer (FireBrowse)TCP11X2 [ Firebrowse - Broad ]
GenevisibleExpression of TCP11X2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100996648
GTEX Portal (Tissue expression)TCP11X2
Human Protein AtlasENSG00000215029-TCP11X2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5H9J9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5H9J9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5H9J9
PhosPhoSitePlusQ5H9J9
Domains : Interpro (EBI)Tcp11   
Domain families : Pfam (Sanger)Tcp11 (PF05794)   
Domain families : Pfam (NCBI)pfam05794   
Conserved Domain (NCBI)TCP11X2
SuperfamilyQ5H9J9
AlphaFold pdb e-kbQ5H9J9   
Human Protein Atlas [tissue]ENSG00000215029-TCP11X2 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q5H9J9
IntAct (EBI)Q5H9J9
BioGRIDTCP11X2
STRING (EMBL)TCP11X2
ZODIACTCP11X2
Ontologies - Pathways
QuickGOQ5H9J9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkTCP11X2
Atlas of Cancer Signalling NetworkTCP11X2
Wikipedia pathwaysTCP11X2
Orthology - Evolution
OrthoDB100996648
GeneTree (enSembl)ENSG00000215029
Phylogenetic Trees/Animal Genes : TreeFamTCP11X2
Homologs : HomoloGeneTCP11X2
Homology/Alignments : Family Browser (UCSC)TCP11X2
Gene fusions - Rearrangements
Fusion : QuiverTCP11X2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTCP11X2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TCP11X2
dbVarTCP11X2
ClinVarTCP11X2
MonarchTCP11X2
1000_GenomesTCP11X2 
Exome Variant ServerTCP11X2
GNOMAD BrowserENSG00000215029
Varsome BrowserTCP11X2
ACMGTCP11X2 variants
VarityQ5H9J9
Genomic Variants (DGV)TCP11X2 [DGVbeta]
DECIPHERTCP11X2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTCP11X2 
Mutations
ICGC Data PortalTCP11X2 
TCGA Data PortalTCP11X2 
Broad Tumor PortalTCP11X2
OASIS PortalTCP11X2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTCP11X2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTCP11X2
Mutations and Diseases : HGMDTCP11X2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTCP11X2
DgiDB (Drug Gene Interaction Database)TCP11X2
DoCM (Curated mutations)TCP11X2
CIViC (Clinical Interpretations of Variants in Cancer)TCP11X2
Cancer3DTCP11X2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTCP11X2
MedgenTCP11X2
Genetic Testing Registry TCP11X2
NextProtQ5H9J9 [Medical]
GENETestsTCP11X2
Target ValidationTCP11X2
Huge Navigator TCP11X2 [HugePedia]
ClinGenTCP11X2
Clinical trials, drugs, therapy
MyCancerGenomeTCP11X2
Protein Interactions : CTDTCP11X2
Pharm GKB GenePA166123747
PharosQ5H9J9
Clinical trialTCP11X2
Miscellaneous
canSAR (ICR)TCP11X2
HarmonizomeTCP11X2
DataMed IndexTCP11X2
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTCP11X2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:25:06 CEST 2021

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