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TDRD7 (tudor domain containing 7)

Identity

Alias (NCBI)CATC4
PCTAIRE2BP
TRAP
HGNC (Hugo) TDRD7
HGNC Alias symbPCTAIRE2BP
LocusID (NCBI) 23424
Atlas_Id 74603
Location 9q22.33  [Link to chromosome band 9q22]
Location_base_pair Starts at 97412096 and ends at 97496123 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TDRD7 (9q22.33) / GNA14 (9q21.2)TDRD7 (9q22.33) / PRR16 (5q23.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TDRD7   30831
Cards
Entrez_Gene (NCBI)TDRD7    tudor domain containing 7
AliasesCATC4; PCTAIRE2BP; TRAP
GeneCards (Weizmann)TDRD7
Ensembl hg19 (Hinxton)ENSG00000196116 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196116 [Gene_View]  ENSG00000196116 [Sequence]  chr9:97412096-97496123 [Contig_View]  TDRD7 [Vega]
ICGC DataPortalENSG00000196116
TCGA cBioPortalTDRD7
AceView (NCBI)TDRD7
Genatlas (Paris)TDRD7
SOURCE (Princeton)TDRD7
Genetics Home Reference (NIH)TDRD7
Genomic and cartography
GoldenPath hg38 (UCSC)TDRD7  -     chr9:97412096-97496123 +  9q22.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TDRD7  -     9q22.33   [Description]    (hg19-Feb_2009)
GoldenPathTDRD7 - 9q22.33 [CytoView hg19]  TDRD7 - 9q22.33 [CytoView hg38]
ImmunoBaseENSG00000196116
Genome Data Viewer NCBITDRD7 [Mapview hg19]  
OMIM611258   613887   
Gene and transcription
Genbank (Entrez)AB025254 AK294488 AK301954 AK310227 AK314853
RefSeq transcript (Entrez)NM_001302884 NM_014290
Consensus coding sequences : CCDS (NCBI)TDRD7
Gene ExpressionTDRD7 [ NCBI-GEO ]   TDRD7 [ EBI - ARRAY_EXPRESS ]   TDRD7 [ SEEK ]   TDRD7 [ MEM ]
Gene Expression Viewer (FireBrowse)TDRD7 [ Firebrowse - Broad ]
GenevisibleExpression of TDRD7 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23424
GTEX Portal (Tissue expression)TDRD7
Human Protein AtlasENSG00000196116-TDRD7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TDRD7
Human Protein Atlas [tissue]ENSG00000196116-TDRD7 [tissue]
HPRD11626
Protein Interaction databases
BioGRIDTDRD7
STRING (EMBL)TDRD7
ZODIACTDRD7
Ontologies - Pathways
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTDRD7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:07 CEST 2021

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