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TEAD3 (TEA domain transcription factor 3)

Identity

Alias_namesTEAD5
TEA domain family member 3
Alias_symbol (synonym)TEF-5
ETFR-1
Other aliasDTEF-1
TEAD-3
TEF5
HGNC (Hugo) TEAD3
LocusID (NCBI) 7005
Atlas_Id 74608
Location 6p21.31  [Link to chromosome band 6p21]
Location_base_pair Starts at 35473597 and ends at 35497084 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
HDAC11 (3p25.1) / TEAD3 (6p21.31)TEAD3 (6p21.31) / TEAD3 (6p21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TEAD3   11716
Cards
Entrez_Gene (NCBI)TEAD3  7005  TEA domain transcription factor 3
AliasesDTEF-1; ETFR-1; TEAD-3; TEAD5; 
TEF-5; TEF5
GeneCards (Weizmann)TEAD3
Ensembl hg19 (Hinxton)ENSG00000007866 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000007866 [Gene_View]  ENSG00000007866 [Sequence]  chr6:35473597-35497084 [Contig_View]  TEAD3 [Vega]
ICGC DataPortalENSG00000007866
TCGA cBioPortalTEAD3
AceView (NCBI)TEAD3
Genatlas (Paris)TEAD3
WikiGenes7005
SOURCE (Princeton)TEAD3
Genetics Home Reference (NIH)TEAD3
Genomic and cartography
GoldenPath hg38 (UCSC)TEAD3  -     chr6:35473597-35497084 -  6p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEAD3  -     6p21.31   [Description]    (hg19-Feb_2009)
EnsemblTEAD3 - 6p21.31 [CytoView hg19]  TEAD3 - 6p21.31 [CytoView hg38]
Mapping of homologs : NCBITEAD3 [Mapview hg19]  TEAD3 [Mapview hg38]
OMIM603170   
Gene and transcription
Genbank (Entrez)AF142482 AK226144 BC010053 BC027877 BC091488
RefSeq transcript (Entrez)NM_003214
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TEAD3
Cluster EST : UnigeneHs.485205 [ NCBI ]
CGAP (NCI)Hs.485205
Alternative Splicing GalleryENSG00000007866
Gene ExpressionTEAD3 [ NCBI-GEO ]   TEAD3 [ EBI - ARRAY_EXPRESS ]   TEAD3 [ SEEK ]   TEAD3 [ MEM ]
Gene Expression Viewer (FireBrowse)TEAD3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7005
GTEX Portal (Tissue expression)TEAD3
Human Protein AtlasENSG00000007866-TEAD3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ99594   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ99594  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ99594
Splice isoforms : SwissVarQ99594
PhosPhoSitePlusQ99594
Domaine pattern : Prosite (Expaxy)TEA_1 (PS00554)    TEA_2 (PS51088)   
Domains : Interpro (EBI)TEA/ATTS_dom    TEF-5    TEF_metazoa   
Domain families : Pfam (Sanger)TEA (PF01285)   
Domain families : Pfam (NCBI)pfam01285   
Domain families : Smart (EMBL)TEA (SM00426)  
Conserved Domain (NCBI)TEAD3
DMDM Disease mutations7005
Blocks (Seattle)TEAD3
PDB (SRS)5EMW   
PDB (PDBSum)5EMW   
PDB (IMB)5EMW   
PDB (RSDB)5EMW   
Structural Biology KnowledgeBase5EMW   
SCOP (Structural Classification of Proteins)5EMW   
CATH (Classification of proteins structures)5EMW   
SuperfamilyQ99594
Human Protein Atlas [tissue]ENSG00000007866-TEAD3 [tissue]
Peptide AtlasQ99594
HPRD04411
IPIIPI00412347   IPI00385455   IPI01020979   IPI00879254   
Protein Interaction databases
DIP (DOE-UCLA)Q99594
IntAct (EBI)Q99594
FunCoupENSG00000007866
BioGRIDTEAD3
STRING (EMBL)TEAD3
ZODIACTEAD3
Ontologies - Pathways
QuickGOQ99594
Ontology : AmiGO###############################################################################################################################################################################################################################################################                              
Ontology : EGO-EBI###############################################################################################################################################################################################################################################################                              
NDEx NetworkTEAD3
Atlas of Cancer Signalling NetworkTEAD3
Wikipedia pathwaysTEAD3
Orthology - Evolution
OrthoDB7005
GeneTree (enSembl)ENSG00000007866
Phylogenetic Trees/Animal Genes : TreeFamTEAD3
HOVERGENQ99594
HOGENOMQ99594
Homologs : HomoloGeneTEAD3
Homology/Alignments : Family Browser (UCSC)TEAD3
Gene fusions - Rearrangements
Fusion : QuiverTEAD3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEAD3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEAD3
dbVarTEAD3
ClinVarTEAD3
1000_GenomesTEAD3 
Exome Variant ServerTEAD3
ExAC (Exome Aggregation Consortium)ENSG00000007866
GNOMAD BrowserENSG00000007866
Varsome BrowserTEAD3
Genetic variants : HAPMAP7005
Genomic Variants (DGV)TEAD3 [DGVbeta]
DECIPHERTEAD3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTEAD3 
Mutations
ICGC Data PortalTEAD3 
TCGA Data PortalTEAD3 
Broad Tumor PortalTEAD3
OASIS PortalTEAD3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTEAD3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTEAD3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TEAD3
DgiDB (Drug Gene Interaction Database)TEAD3
DoCM (Curated mutations)TEAD3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TEAD3 (select a term)
intoGenTEAD3
Cancer3DTEAD3(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603170   
Orphanet
DisGeNETTEAD3
MedgenTEAD3
Genetic Testing Registry TEAD3
NextProtQ99594 [Medical]
TSGene7005
GENETestsTEAD3
Target ValidationTEAD3
Huge Navigator TEAD3 [HugePedia]
snp3D : Map Gene to Disease7005
BioCentury BCIQTEAD3
ClinGenTEAD3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7005
Chemical/Pharm GKB GenePA36434
Clinical trialTEAD3
Miscellaneous
canSAR (ICR)TEAD3 (select the gene name)
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTEAD3
EVEXTEAD3
GoPubMedTEAD3
iHOPTEAD3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:34:27 CEST 2018

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