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TECPR2 (tectonin beta-propeller repeat containing 2)

Identity

Alias (NCBI)KIAA0329
SPG49
HGNC (Hugo) TECPR2
HGNC Previous nameKIAA0329
HGNC Previous nameKIAA0329
LocusID (NCBI) 9895
Atlas_Id 74610
Location 14q32.31  [Link to chromosome band 14q32]
Location_base_pair Starts at 102362941 and ends at 102502474 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DGKG (3q27.2) / TECPR2 (14q32.31)RCOR1 (14q32.31) / TECPR2 (14q32.31)UBE2E3 (2q31.3) / TECPR2 (14q32.31)
RCOR1 TECPR2UBE2E3 TECPR2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TECPR2   19957
Cards
Entrez_Gene (NCBI)TECPR2    tectonin beta-propeller repeat containing 2
AliasesKIAA0329; SPG49
GeneCards (Weizmann)TECPR2
Ensembl hg19 (Hinxton)ENSG00000196663 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196663 [Gene_View]  ENSG00000196663 [Sequence]  chr14:102362941-102502474 [Contig_View]  TECPR2 [Vega]
ICGC DataPortalENSG00000196663
TCGA cBioPortalTECPR2
AceView (NCBI)TECPR2
Genatlas (Paris)TECPR2
SOURCE (Princeton)TECPR2
Genetics Home Reference (NIH)TECPR2
Genomic and cartography
GoldenPath hg38 (UCSC)TECPR2  -     chr14:102362941-102502474 +  14q32.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TECPR2  -     14q32.31   [Description]    (hg19-Feb_2009)
GoldenPathTECPR2 - 14q32.31 [CytoView hg19]  TECPR2 - 14q32.31 [CytoView hg38]
ImmunoBaseENSG00000196663
Genome Data Viewer NCBITECPR2 [Mapview hg19]  
OMIM615000   615031   
Gene and transcription
Genbank (Entrez)AB002295 AB002327 AK127721 AK296395 AK299690
RefSeq transcript (Entrez)NM_001172631 NM_014844
Consensus coding sequences : CCDS (NCBI)TECPR2
Gene ExpressionTECPR2 [ NCBI-GEO ]   TECPR2 [ EBI - ARRAY_EXPRESS ]   TECPR2 [ SEEK ]   TECPR2 [ MEM ]
Gene Expression Viewer (FireBrowse)TECPR2 [ Firebrowse - Broad ]
GenevisibleExpression of TECPR2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9895
GTEX Portal (Tissue expression)TECPR2
Human Protein AtlasENSG00000196663-TECPR2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO15040   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO15040  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO15040
PhosPhoSitePlusO15040
Domains : Interpro (EBI)Beta-propeller_rpt_TECPR    RCC1/BLIP-II    TECPR2    WD40/YVTN_repeat-like_dom_sf    WD40_repeat    WD40_repeat_dom_sf   
Domain families : Pfam (Sanger)Hyd_WA (PF06462)    Tectonin (PF19193)   
Domain families : Pfam (NCBI)pfam06462    pfam19193   
Domain families : Smart (EMBL)TECPR (SM00706)  WD40 (SM00320)  
Conserved Domain (NCBI)TECPR2
SuperfamilyO15040
AlphaFold pdb e-kbO15040   
Human Protein Atlas [tissue]ENSG00000196663-TECPR2 [tissue]
HPRD17184
Protein Interaction databases
DIP (DOE-UCLA)O15040
IntAct (EBI)O15040
BioGRIDTECPR2
STRING (EMBL)TECPR2
ZODIACTECPR2
Ontologies - Pathways
QuickGOO15040
Ontology : AmiGOprotein binding  cytoplasm  autophagy  protein exit from endoplasmic reticulum  
Ontology : EGO-EBIprotein binding  cytoplasm  autophagy  protein exit from endoplasmic reticulum  
NDEx NetworkTECPR2
Atlas of Cancer Signalling NetworkTECPR2
Wikipedia pathwaysTECPR2
Orthology - Evolution
OrthoDB9895
GeneTree (enSembl)ENSG00000196663
Phylogenetic Trees/Animal Genes : TreeFamTECPR2
Homologs : HomoloGeneTECPR2
Homology/Alignments : Family Browser (UCSC)TECPR2
Gene fusions - Rearrangements
Fusion : QuiverTECPR2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTECPR2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TECPR2
dbVarTECPR2
ClinVarTECPR2
MonarchTECPR2
1000_GenomesTECPR2 
Exome Variant ServerTECPR2
GNOMAD BrowserENSG00000196663
Varsome BrowserTECPR2
ACMGTECPR2 variants
VarityO15040
Genomic Variants (DGV)TECPR2 [DGVbeta]
DECIPHERTECPR2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTECPR2 
Mutations
ICGC Data PortalTECPR2 
TCGA Data PortalTECPR2 
Broad Tumor PortalTECPR2
OASIS PortalTECPR2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTECPR2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTECPR2
Mutations and Diseases : HGMDTECPR2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTECPR2
DgiDB (Drug Gene Interaction Database)TECPR2
DoCM (Curated mutations)TECPR2
CIViC (Clinical Interpretations of Variants in Cancer)TECPR2
Cancer3DTECPR2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615000    615031   
Orphanet21718   
DisGeNETTECPR2
MedgenTECPR2
Genetic Testing Registry TECPR2
NextProtO15040 [Medical]
GENETestsTECPR2
Target ValidationTECPR2
Huge Navigator TECPR2 [HugePedia]
ClinGenTECPR2
Clinical trials, drugs, therapy
MyCancerGenomeTECPR2
Protein Interactions : CTDTECPR2
Pharm GKB GenePA164726437
PharosO15040
Clinical trialTECPR2
Miscellaneous
canSAR (ICR)TECPR2
HarmonizomeTECPR2
DataMed IndexTECPR2
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTECPR2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:09 CEST 2021

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