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TECTB (tectorin beta)

Identity

Alias (NCBI)-
HGNC (Hugo) TECTB
LocusID (NCBI) 6975
Atlas_Id 53185
Location 10q25.2  [Link to chromosome band 10q25]
Location_base_pair Starts at 112283400 and ends at 112305038 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TECTB   11721
Cards
Entrez_Gene (NCBI)TECTB    tectorin beta
Aliases
GeneCards (Weizmann)TECTB
Ensembl hg19 (Hinxton)ENSG00000119913 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000119913 [Gene_View]  ENSG00000119913 [Sequence]  chr10:112283400-112305038 [Contig_View]  TECTB [Vega]
ICGC DataPortalENSG00000119913
TCGA cBioPortalTECTB
AceView (NCBI)TECTB
Genatlas (Paris)TECTB
SOURCE (Princeton)TECTB
Genetics Home Reference (NIH)TECTB
Genomic and cartography
GoldenPath hg38 (UCSC)TECTB  -     chr10:112283400-112305038 +  10q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TECTB  -     10q25.2   [Description]    (hg19-Feb_2009)
GoldenPathTECTB - 10q25.2 [CytoView hg19]  TECTB - 10q25.2 [CytoView hg38]
ImmunoBaseENSG00000119913
Genome Data Viewer NCBITECTB [Mapview hg19]  
OMIM602653   
Gene and transcription
Genbank (Entrez)AF312827 AW021518 BC113497 BC113499
RefSeq transcript (Entrez)NM_058222
Consensus coding sequences : CCDS (NCBI)TECTB
Gene ExpressionTECTB [ NCBI-GEO ]   TECTB [ EBI - ARRAY_EXPRESS ]   TECTB [ SEEK ]   TECTB [ MEM ]
Gene Expression Viewer (FireBrowse)TECTB [ Firebrowse - Broad ]
GenevisibleExpression of TECTB in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6975
GTEX Portal (Tissue expression)TECTB
Human Protein AtlasENSG00000119913-TECTB [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96PL2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96PL2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96PL2
PhosPhoSitePlusQ96PL2
Domaine pattern : Prosite (Expaxy)ZP_1 (PS00682)    ZP_2 (PS51034)   
Domains : Interpro (EBI)ZP_dom    ZP_dom_CS   
Domain families : Pfam (Sanger)Zona_pellucida (PF00100)   
Domain families : Pfam (NCBI)pfam00100   
Domain families : Smart (EMBL)ZP (SM00241)  
Conserved Domain (NCBI)TECTB
SuperfamilyQ96PL2
AlphaFold pdb e-kbQ96PL2   
Human Protein Atlas [tissue]ENSG00000119913-TECTB [tissue]
HPRD16005
Protein Interaction databases
DIP (DOE-UCLA)Q96PL2
IntAct (EBI)Q96PL2
BioGRIDTECTB
STRING (EMBL)TECTB
ZODIACTECTB
Ontologies - Pathways
QuickGOQ96PL2
Ontology : AmiGOextracellular matrix structural constituent  extracellular region  extracellular space  plasma membrane  cell surface  anchored component of membrane  
Ontology : EGO-EBIextracellular matrix structural constituent  extracellular region  extracellular space  plasma membrane  cell surface  anchored component of membrane  
NDEx NetworkTECTB
Atlas of Cancer Signalling NetworkTECTB
Wikipedia pathwaysTECTB
Orthology - Evolution
OrthoDB6975
GeneTree (enSembl)ENSG00000119913
Phylogenetic Trees/Animal Genes : TreeFamTECTB
Homologs : HomoloGeneTECTB
Homology/Alignments : Family Browser (UCSC)TECTB
Gene fusions - Rearrangements
Fusion : QuiverTECTB
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTECTB [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TECTB
dbVarTECTB
ClinVarTECTB
MonarchTECTB
1000_GenomesTECTB 
Exome Variant ServerTECTB
GNOMAD BrowserENSG00000119913
Varsome BrowserTECTB
ACMGTECTB variants
VarityQ96PL2
Genomic Variants (DGV)TECTB [DGVbeta]
DECIPHERTECTB [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTECTB 
Mutations
ICGC Data PortalTECTB 
TCGA Data PortalTECTB 
Broad Tumor PortalTECTB
OASIS PortalTECTB [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTECTB  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTECTB
Mutations and Diseases : HGMDTECTB
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTECTB
DgiDB (Drug Gene Interaction Database)TECTB
DoCM (Curated mutations)TECTB
CIViC (Clinical Interpretations of Variants in Cancer)TECTB
Cancer3DTECTB
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602653   
Orphanet
DisGeNETTECTB
MedgenTECTB
Genetic Testing Registry TECTB
NextProtQ96PL2 [Medical]
GENETestsTECTB
Target ValidationTECTB
Huge Navigator TECTB [HugePedia]
ClinGenTECTB
Clinical trials, drugs, therapy
MyCancerGenomeTECTB
Protein Interactions : CTDTECTB
Pharm GKB GenePA36438
PharosQ96PL2
Clinical trialTECTB
Miscellaneous
canSAR (ICR)TECTB
HarmonizomeTECTB
DataMed IndexTECTB
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTECTB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:34:43 CEST 2021

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