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TEKT2 (tektin 2)

Identity

Alias (NCBI)TEKTB1
TEKTIN-T
h-tektin-t
HGNC (Hugo) TEKT2
HGNC Alias symbTEKTB1
HGNC Previous nametektin 2 (testicular)
LocusID (NCBI) 27285
Atlas_Id 74615
Location 1p34.3  [Link to chromosome band 1p34]
Location_base_pair Starts at 36084094 and ends at 36088275 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TEKT2   11725
Cards
Entrez_Gene (NCBI)TEKT2    tektin 2
AliasesTEKTB1; TEKTIN-T; h-tektin-t
GeneCards (Weizmann)TEKT2
Ensembl hg19 (Hinxton)ENSG00000092850 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000092850 [Gene_View]  ENSG00000092850 [Sequence]  chr1:36084094-36088275 [Contig_View]  TEKT2 [Vega]
ICGC DataPortalENSG00000092850
TCGA cBioPortalTEKT2
AceView (NCBI)TEKT2
Genatlas (Paris)TEKT2
SOURCE (Princeton)TEKT2
Genetics Home Reference (NIH)TEKT2
Genomic and cartography
GoldenPath hg38 (UCSC)TEKT2  -     chr1:36084094-36088275 +  1p34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEKT2  -     1p34.3   [Description]    (hg19-Feb_2009)
GoldenPathTEKT2 - 1p34.3 [CytoView hg19]  TEKT2 - 1p34.3 [CytoView hg38]
ImmunoBaseENSG00000092850
Genome Data Viewer NCBITEKT2 [Mapview hg19]  
OMIM608953   
Gene and transcription
Genbank (Entrez)AB033823 AF054910 AK313610 BC022005 BC035620
RefSeq transcript (Entrez)NM_014466
Consensus coding sequences : CCDS (NCBI)TEKT2
Gene ExpressionTEKT2 [ NCBI-GEO ]   TEKT2 [ EBI - ARRAY_EXPRESS ]   TEKT2 [ SEEK ]   TEKT2 [ MEM ]
Gene Expression Viewer (FireBrowse)TEKT2 [ Firebrowse - Broad ]
GenevisibleExpression of TEKT2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27285
GTEX Portal (Tissue expression)TEKT2
Human Protein AtlasENSG00000092850-TEKT2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UIF3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UIF3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UIF3
PhosPhoSitePlusQ9UIF3
Domains : Interpro (EBI)Tektin   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TEKT2
SuperfamilyQ9UIF3
AlphaFold pdb e-kbQ9UIF3   
Human Protein Atlas [tissue]ENSG00000092850-TEKT2 [tissue]
HPRD16410
Protein Interaction databases
DIP (DOE-UCLA)Q9UIF3
IntAct (EBI)Q9UIF3
BioGRIDTEKT2
STRING (EMBL)TEKT2
ZODIACTEKT2
Ontologies - Pathways
QuickGOQ9UIF3
Ontology : AmiGOnucleus  cytoplasm  microtubule organizing center  microtubule  microtubule cytoskeleton  flagellated sperm motility  motile cilium  inner dynein arm assembly  cilium assembly  cilium movement involved in cell motility  
Ontology : EGO-EBInucleus  cytoplasm  microtubule organizing center  microtubule  microtubule cytoskeleton  flagellated sperm motility  motile cilium  inner dynein arm assembly  cilium assembly  cilium movement involved in cell motility  
NDEx NetworkTEKT2
Atlas of Cancer Signalling NetworkTEKT2
Wikipedia pathwaysTEKT2
Orthology - Evolution
OrthoDB27285
GeneTree (enSembl)ENSG00000092850
Phylogenetic Trees/Animal Genes : TreeFamTEKT2
Homologs : HomoloGeneTEKT2
Homology/Alignments : Family Browser (UCSC)TEKT2
Gene fusions - Rearrangements
Fusion : QuiverTEKT2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEKT2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEKT2
dbVarTEKT2
ClinVarTEKT2
MonarchTEKT2
1000_GenomesTEKT2 
Exome Variant ServerTEKT2
GNOMAD BrowserENSG00000092850
Varsome BrowserTEKT2
ACMGTEKT2 variants
VarityQ9UIF3
Genomic Variants (DGV)TEKT2 [DGVbeta]
DECIPHERTEKT2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTEKT2 
Mutations
ICGC Data PortalTEKT2 
TCGA Data PortalTEKT2 
Broad Tumor PortalTEKT2
OASIS PortalTEKT2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTEKT2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTEKT2
Mutations and Diseases : HGMDTEKT2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTEKT2
DgiDB (Drug Gene Interaction Database)TEKT2
DoCM (Curated mutations)TEKT2
CIViC (Clinical Interpretations of Variants in Cancer)TEKT2
Cancer3DTEKT2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608953   
Orphanet
DisGeNETTEKT2
MedgenTEKT2
Genetic Testing Registry TEKT2
NextProtQ9UIF3 [Medical]
GENETestsTEKT2
Target ValidationTEKT2
Huge Navigator TEKT2 [HugePedia]
ClinGenTEKT2
Clinical trials, drugs, therapy
MyCancerGenomeTEKT2
Protein Interactions : CTDTEKT2
Pharm GKB GenePA36442
PharosQ9UIF3
Clinical trialTEKT2
Miscellaneous
canSAR (ICR)TEKT2
HarmonizomeTEKT2
DataMed IndexTEKT2
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTEKT2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:11 CEST 2021

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