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TEKT3 (tektin 3)

Identity

Alias (NCBI)-
HGNC (Hugo) TEKT3
HGNC Alias symbFLJ32828
LocusID (NCBI) 64518
Atlas_Id 74616
Location 17p12  [Link to chromosome band 17p12]
Location_base_pair Starts at 15303812 and ends at 15341597 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
COPS3 (17p11.2) / TEKT3 (17p12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TEKT3   14293
Cards
Entrez_Gene (NCBI)TEKT3    tektin 3
Aliases
GeneCards (Weizmann)TEKT3
Ensembl hg19 (Hinxton)ENSG00000125409 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000125409 [Gene_View]  ENSG00000125409 [Sequence]  chr17:15303812-15341597 [Contig_View]  TEKT3 [Vega]
ICGC DataPortalENSG00000125409
TCGA cBioPortalTEKT3
AceView (NCBI)TEKT3
Genatlas (Paris)TEKT3
SOURCE (Princeton)TEKT3
Genetics Home Reference (NIH)TEKT3
Genomic and cartography
GoldenPath hg38 (UCSC)TEKT3  -     chr17:15303812-15341597 -  17p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEKT3  -     17p12   [Description]    (hg19-Feb_2009)
GoldenPathTEKT3 - 17p12 [CytoView hg19]  TEKT3 - 17p12 [CytoView hg38]
ImmunoBaseENSG00000125409
Genome Data Viewer NCBITEKT3 [Mapview hg19]  
OMIM612683   
Gene and transcription
Genbank (Entrez)AF334676 AK057390 AK223534 AK314327 BC031688
RefSeq transcript (Entrez)NM_031898
Consensus coding sequences : CCDS (NCBI)TEKT3
Gene ExpressionTEKT3 [ NCBI-GEO ]   TEKT3 [ EBI - ARRAY_EXPRESS ]   TEKT3 [ SEEK ]   TEKT3 [ MEM ]
Gene Expression Viewer (FireBrowse)TEKT3 [ Firebrowse - Broad ]
GenevisibleExpression of TEKT3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64518
GTEX Portal (Tissue expression)TEKT3
Human Protein AtlasENSG00000125409-TEKT3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXF9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXF9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXF9
PhosPhoSitePlusQ9BXF9
Domains : Interpro (EBI)Tektin   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TEKT3
SuperfamilyQ9BXF9
AlphaFold pdb e-kbQ9BXF9   
Human Protein Atlas [tissue]ENSG00000125409-TEKT3 [tissue]
HPRD18173
Protein Interaction databases
DIP (DOE-UCLA)Q9BXF9
IntAct (EBI)Q9BXF9
BioGRIDTEKT3
STRING (EMBL)TEKT3
ZODIACTEKT3
Ontologies - Pathways
QuickGOQ9BXF9
Ontology : AmiGOacrosomal membrane  outer acrosomal membrane  molecular_function  protein binding  nucleus  microtubule cytoskeleton  flagellated sperm motility  sperm flagellum  sperm flagellum  cilium assembly  cilium assembly  cilium movement involved in cell motility  regulation of brood size  extracellular exosome  
Ontology : EGO-EBIacrosomal membrane  outer acrosomal membrane  molecular_function  protein binding  nucleus  microtubule cytoskeleton  flagellated sperm motility  sperm flagellum  sperm flagellum  cilium assembly  cilium assembly  cilium movement involved in cell motility  regulation of brood size  extracellular exosome  
NDEx NetworkTEKT3
Atlas of Cancer Signalling NetworkTEKT3
Wikipedia pathwaysTEKT3
Orthology - Evolution
OrthoDB64518
GeneTree (enSembl)ENSG00000125409
Phylogenetic Trees/Animal Genes : TreeFamTEKT3
Homologs : HomoloGeneTEKT3
Homology/Alignments : Family Browser (UCSC)TEKT3
Gene fusions - Rearrangements
Fusion : QuiverTEKT3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEKT3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEKT3
dbVarTEKT3
ClinVarTEKT3
MonarchTEKT3
1000_GenomesTEKT3 
Exome Variant ServerTEKT3
GNOMAD BrowserENSG00000125409
Varsome BrowserTEKT3
ACMGTEKT3 variants
VarityQ9BXF9
Genomic Variants (DGV)TEKT3 [DGVbeta]
DECIPHERTEKT3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTEKT3 
Mutations
ICGC Data PortalTEKT3 
TCGA Data PortalTEKT3 
Broad Tumor PortalTEKT3
OASIS PortalTEKT3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTEKT3  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTEKT3
Mutations and Diseases : HGMDTEKT3
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTEKT3
DgiDB (Drug Gene Interaction Database)TEKT3
DoCM (Curated mutations)TEKT3
CIViC (Clinical Interpretations of Variants in Cancer)TEKT3
Cancer3DTEKT3
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612683   
Orphanet
DisGeNETTEKT3
MedgenTEKT3
Genetic Testing Registry TEKT3
NextProtQ9BXF9 [Medical]
GENETestsTEKT3
Target ValidationTEKT3
Huge Navigator TEKT3 [HugePedia]
ClinGenTEKT3
Clinical trials, drugs, therapy
MyCancerGenomeTEKT3
Protein Interactions : CTDTEKT3
Pharm GKB GenePA37865
PharosQ9BXF9
Clinical trialTEKT3
Miscellaneous
canSAR (ICR)TEKT3
HarmonizomeTEKT3
DataMed IndexTEKT3
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTEKT3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:11 CEST 2021

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