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TEKT3 (tektin 3)

Identity

Alias_symbol (synonym)FLJ32828
Other alias-
HGNC (Hugo) TEKT3
LocusID (NCBI) 64518
Atlas_Id 74616
Location 17p12  [Link to chromosome band 17p12]
Location_base_pair Starts at 15207129 and ends at 15244958 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
COPS3 (17p11.2) / TEKT3 (17p12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TEKT3   14293
Cards
Entrez_Gene (NCBI)TEKT3  64518  tektin 3
Aliases
GeneCards (Weizmann)TEKT3
Ensembl hg19 (Hinxton)ENSG00000125409 [Gene_View]  chr17:15207129-15244958 [Contig_View]  TEKT3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000125409 [Gene_View]  chr17:15207129-15244958 [Contig_View]  TEKT3 [Vega]
ICGC DataPortalENSG00000125409
TCGA cBioPortalTEKT3
AceView (NCBI)TEKT3
Genatlas (Paris)TEKT3
WikiGenes64518
SOURCE (Princeton)TEKT3
Genetics Home Reference (NIH)TEKT3
Genomic and cartography
GoldenPath hg19 (UCSC)TEKT3  -     chr17:15207129-15244958 -  17p12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TEKT3  -     17p12   [Description]    (hg38-Dec_2013)
EnsemblTEKT3 - 17p12 [CytoView hg19]  TEKT3 - 17p12 [CytoView hg38]
Mapping of homologs : NCBITEKT3 [Mapview hg19]  TEKT3 [Mapview hg38]
OMIM612683   
Gene and transcription
Genbank (Entrez)AF334676 AK057390 AK223534 AK314327 BC031688
RefSeq transcript (Entrez)NM_031898
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010718 NW_004929405
Consensus coding sequences : CCDS (NCBI)TEKT3
Cluster EST : UnigeneHs.414648 [ NCBI ]
CGAP (NCI)Hs.414648
Alternative Splicing GalleryENSG00000125409
Gene ExpressionTEKT3 [ NCBI-GEO ]   TEKT3 [ EBI - ARRAY_EXPRESS ]   TEKT3 [ SEEK ]   TEKT3 [ MEM ]
Gene Expression Viewer (FireBrowse)TEKT3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64518
GTEX Portal (Tissue expression)TEKT3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXF9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXF9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXF9
Splice isoforms : SwissVarQ9BXF9
PhosPhoSitePlusQ9BXF9
Domains : Interpro (EBI)Tektin   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TEKT3
DMDM Disease mutations64518
Blocks (Seattle)TEKT3
SuperfamilyQ9BXF9
Human Protein AtlasENSG00000125409
Peptide AtlasQ9BXF9
HPRD18173
IPIIPI00011073   IPI01013040   IPI01011738   IPI01012220   IPI01012123   IPI01012469   
Protein Interaction databases
DIP (DOE-UCLA)Q9BXF9
IntAct (EBI)Q9BXF9
FunCoupENSG00000125409
BioGRIDTEKT3
STRING (EMBL)TEKT3
ZODIACTEKT3
Ontologies - Pathways
QuickGOQ9BXF9
Ontology : AmiGOacrosomal membrane  molecular_function  protein binding  nucleus  microtubule  sperm motility  sperm flagellum  cilium morphogenesis  extracellular exosome  regulation of fertilization  
Ontology : EGO-EBIacrosomal membrane  molecular_function  protein binding  nucleus  microtubule  sperm motility  sperm flagellum  cilium morphogenesis  extracellular exosome  regulation of fertilization  
NDEx NetworkTEKT3
Atlas of Cancer Signalling NetworkTEKT3
Wikipedia pathwaysTEKT3
Orthology - Evolution
OrthoDB64518
GeneTree (enSembl)ENSG00000125409
Phylogenetic Trees/Animal Genes : TreeFamTEKT3
HOVERGENQ9BXF9
HOGENOMQ9BXF9
Homologs : HomoloGeneTEKT3
Homology/Alignments : Family Browser (UCSC)TEKT3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEKT3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEKT3
dbVarTEKT3
ClinVarTEKT3
1000_GenomesTEKT3 
Exome Variant ServerTEKT3
ExAC (Exome Aggregation Consortium)TEKT3 (select the gene name)
Genetic variants : HAPMAP64518
Genomic Variants (DGV)TEKT3 [DGVbeta]
DECIPHER (Syndromes)17:15207129-15244958  ENSG00000125409
CONAN: Copy Number AnalysisTEKT3 
Mutations
ICGC Data PortalTEKT3 
TCGA Data PortalTEKT3 
Broad Tumor PortalTEKT3
OASIS PortalTEKT3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTEKT3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTEKT3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TEKT3
DgiDB (Drug Gene Interaction Database)TEKT3
DoCM (Curated mutations)TEKT3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TEKT3 (select a term)
intoGenTEKT3
Cancer3DTEKT3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612683   
Orphanet
MedgenTEKT3
Genetic Testing Registry TEKT3
NextProtQ9BXF9 [Medical]
TSGene64518
GENETestsTEKT3
Huge Navigator TEKT3 [HugePedia]
snp3D : Map Gene to Disease64518
BioCentury BCIQTEKT3
ClinGenTEKT3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64518
Chemical/Pharm GKB GenePA37865
Clinical trialTEKT3
Miscellaneous
canSAR (ICR)TEKT3 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTEKT3
EVEXTEKT3
GoPubMedTEKT3
iHOPTEKT3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:47:48 CET 2017

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