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TEKT4 (tektin 4)

Identity

Alias_symbol (synonym)MGC27019
Other alias-
HGNC (Hugo) TEKT4
LocusID (NCBI) 150483
Atlas_Id 74617
Location 2q11.1  [Link to chromosome band 2q11]
Location_base_pair Starts at 94871433 and ends at 94876829 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TEKT4   31012
Cards
Entrez_Gene (NCBI)TEKT4  150483  tektin 4
Aliases
GeneCards (Weizmann)TEKT4
Ensembl hg19 (Hinxton)ENSG00000163060 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163060 [Gene_View]  chr2:94871433-94876829 [Contig_View]  TEKT4 [Vega]
ICGC DataPortalENSG00000163060
TCGA cBioPortalTEKT4
AceView (NCBI)TEKT4
Genatlas (Paris)TEKT4
WikiGenes150483
SOURCE (Princeton)TEKT4
Genetics Home Reference (NIH)TEKT4
Genomic and cartography
GoldenPath hg38 (UCSC)TEKT4  -     chr2:94871433-94876829 +  2q11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEKT4  -     2q11.1   [Description]    (hg19-Feb_2009)
EnsemblTEKT4 - 2q11.1 [CytoView hg19]  TEKT4 - 2q11.1 [CytoView hg38]
Mapping of homologs : NCBITEKT4 [Mapview hg19]  TEKT4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA626939 AK097438 AK296678 BC021716 BI832036
RefSeq transcript (Entrez)NM_001286559 NM_144705
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TEKT4
Cluster EST : UnigeneHs.631517 [ NCBI ]
CGAP (NCI)Hs.631517
Alternative Splicing GalleryENSG00000163060
Gene ExpressionTEKT4 [ NCBI-GEO ]   TEKT4 [ EBI - ARRAY_EXPRESS ]   TEKT4 [ SEEK ]   TEKT4 [ MEM ]
Gene Expression Viewer (FireBrowse)TEKT4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)150483
GTEX Portal (Tissue expression)TEKT4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WW24   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WW24  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WW24
Splice isoforms : SwissVarQ8WW24
PhosPhoSitePlusQ8WW24
Domains : Interpro (EBI)Tektin   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TEKT4
DMDM Disease mutations150483
Blocks (Seattle)TEKT4
SuperfamilyQ8WW24
Human Protein AtlasENSG00000163060
Peptide AtlasQ8WW24
HPRD14518
IPIIPI00103206   IPI00908719   IPI00979502   
Protein Interaction databases
DIP (DOE-UCLA)Q8WW24
IntAct (EBI)Q8WW24
FunCoupENSG00000163060
BioGRIDTEKT4
STRING (EMBL)TEKT4
ZODIACTEKT4
Ontologies - Pathways
QuickGOQ8WW24
Ontology : AmiGOprotein binding  nucleus  cytoplasm  microtubule  flagellated sperm motility  sperm flagellum  cilium assembly  cilium movement involved in cell motility  
Ontology : EGO-EBIprotein binding  nucleus  cytoplasm  microtubule  flagellated sperm motility  sperm flagellum  cilium assembly  cilium movement involved in cell motility  
NDEx NetworkTEKT4
Atlas of Cancer Signalling NetworkTEKT4
Wikipedia pathwaysTEKT4
Orthology - Evolution
OrthoDB150483
GeneTree (enSembl)ENSG00000163060
Phylogenetic Trees/Animal Genes : TreeFamTEKT4
HOVERGENQ8WW24
HOGENOMQ8WW24
Homologs : HomoloGeneTEKT4
Homology/Alignments : Family Browser (UCSC)TEKT4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEKT4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEKT4
dbVarTEKT4
ClinVarTEKT4
1000_GenomesTEKT4 
Exome Variant ServerTEKT4
ExAC (Exome Aggregation Consortium)TEKT4 (select the gene name)
Genetic variants : HAPMAP150483
Genomic Variants (DGV)TEKT4 [DGVbeta]
DECIPHERTEKT4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTEKT4 
Mutations
ICGC Data PortalTEKT4 
TCGA Data PortalTEKT4 
Broad Tumor PortalTEKT4
OASIS PortalTEKT4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTEKT4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTEKT4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TEKT4
DgiDB (Drug Gene Interaction Database)TEKT4
DoCM (Curated mutations)TEKT4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TEKT4 (select a term)
intoGenTEKT4
Cancer3DTEKT4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTEKT4
Genetic Testing Registry TEKT4
NextProtQ8WW24 [Medical]
TSGene150483
GENETestsTEKT4
Target ValidationTEKT4
Huge Navigator TEKT4 [HugePedia]
snp3D : Map Gene to Disease150483
BioCentury BCIQTEKT4
ClinGenTEKT4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD150483
Chemical/Pharm GKB GenePA142670819
Clinical trialTEKT4
Miscellaneous
canSAR (ICR)TEKT4 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTEKT4
EVEXTEKT4
GoPubMedTEKT4
iHOPTEKT4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Sep 18 13:41:13 CEST 2017

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