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TEKT5 (tektin 5)

Identity

Alias (NCBI)CT149
HGNC (Hugo) TEKT5
HGNC Alias symbFLJ32871
CT149
LocusID (NCBI) 146279
Atlas_Id 74618
Location 16p13.13  [Link to chromosome band 16p13]
Location_base_pair Starts at 10627501 and ends at 10694930 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TEKT5 (16p13.13) / RMI2 (16p13.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TEKT5   26554
Cards
Entrez_Gene (NCBI)TEKT5    tektin 5
AliasesCT149
GeneCards (Weizmann)TEKT5
Ensembl hg19 (Hinxton)ENSG00000153060 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000153060 [Gene_View]  ENSG00000153060 [Sequence]  chr16:10627501-10694930 [Contig_View]  TEKT5 [Vega]
ICGC DataPortalENSG00000153060
TCGA cBioPortalTEKT5
AceView (NCBI)TEKT5
Genatlas (Paris)TEKT5
SOURCE (Princeton)TEKT5
Genetics Home Reference (NIH)TEKT5
Genomic and cartography
GoldenPath hg38 (UCSC)TEKT5  -     chr16:10627501-10694930 -  16p13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEKT5  -     16p13.13   [Description]    (hg19-Feb_2009)
GoldenPathTEKT5 - 16p13.13 [CytoView hg19]  TEKT5 - 16p13.13 [CytoView hg38]
ImmunoBaseENSG00000153060
Genome Data Viewer NCBITEKT5 [Mapview hg19]  
OMIM618686   
Gene and transcription
Genbank (Entrez)AK057433 BC041081 BC130336 BC130338
RefSeq transcript (Entrez)NM_144674
Consensus coding sequences : CCDS (NCBI)TEKT5
Gene ExpressionTEKT5 [ NCBI-GEO ]   TEKT5 [ EBI - ARRAY_EXPRESS ]   TEKT5 [ SEEK ]   TEKT5 [ MEM ]
Gene Expression Viewer (FireBrowse)TEKT5 [ Firebrowse - Broad ]
GenevisibleExpression of TEKT5 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)146279
GTEX Portal (Tissue expression)TEKT5
Human Protein AtlasENSG00000153060-TEKT5 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96M29   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96M29  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96M29
PhosPhoSitePlusQ96M29
Domains : Interpro (EBI)Tektin   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TEKT5
SuperfamilyQ96M29
AlphaFold pdb e-kbQ96M29   
Human Protein Atlas [tissue]ENSG00000153060-TEKT5 [tissue]
HPRD08736
Protein Interaction databases
DIP (DOE-UCLA)Q96M29
IntAct (EBI)Q96M29
BioGRIDTEKT5
STRING (EMBL)TEKT5
ZODIACTEKT5
Ontologies - Pathways
QuickGOQ96M29
Ontology : AmiGOprotein binding  nucleus  microtubule cytoskeleton  sperm flagellum  cilium assembly  cilium movement involved in cell motility  
Ontology : EGO-EBIprotein binding  nucleus  microtubule cytoskeleton  sperm flagellum  cilium assembly  cilium movement involved in cell motility  
NDEx NetworkTEKT5
Atlas of Cancer Signalling NetworkTEKT5
Wikipedia pathwaysTEKT5
Orthology - Evolution
OrthoDB146279
GeneTree (enSembl)ENSG00000153060
Phylogenetic Trees/Animal Genes : TreeFamTEKT5
Homologs : HomoloGeneTEKT5
Homology/Alignments : Family Browser (UCSC)TEKT5
Gene fusions - Rearrangements
Fusion : QuiverTEKT5
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEKT5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEKT5
dbVarTEKT5
ClinVarTEKT5
MonarchTEKT5
1000_GenomesTEKT5 
Exome Variant ServerTEKT5
GNOMAD BrowserENSG00000153060
Varsome BrowserTEKT5
ACMGTEKT5 variants
VarityQ96M29
Genomic Variants (DGV)TEKT5 [DGVbeta]
DECIPHERTEKT5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTEKT5 
Mutations
ICGC Data PortalTEKT5 
TCGA Data PortalTEKT5 
Broad Tumor PortalTEKT5
OASIS PortalTEKT5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTEKT5  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTEKT5
Mutations and Diseases : HGMDTEKT5
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTEKT5
DgiDB (Drug Gene Interaction Database)TEKT5
DoCM (Curated mutations)TEKT5
CIViC (Clinical Interpretations of Variants in Cancer)TEKT5
Cancer3DTEKT5
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM618686   
Orphanet
DisGeNETTEKT5
MedgenTEKT5
Genetic Testing Registry TEKT5
NextProtQ96M29 [Medical]
GENETestsTEKT5
Target ValidationTEKT5
Huge Navigator TEKT5 [HugePedia]
ClinGenTEKT5
Clinical trials, drugs, therapy
MyCancerGenomeTEKT5
Protein Interactions : CTDTEKT5
Pharm GKB GenePA162405603
PharosQ96M29
Clinical trialTEKT5
Miscellaneous
canSAR (ICR)TEKT5
HarmonizomeTEKT5
DataMed IndexTEKT5
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTEKT5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:25:11 CEST 2021

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